Crassostrea virginica (eastern oyster): 111135393
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Entry
111135393 CDS
T09197
Name
(RefSeq) transcription factor E2F5-like isoform X1
KO
K04682
transcription factor E2F4/5
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111135393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111135393
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
111135393
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
HTH_Cmi2_C
MCPVI
Motif
Other DBs
NCBI-GeneID:
111135393
NCBI-ProteinID:
XP_022341121
UniProt:
A0A8B8EMH1
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Position
5:57225493..57230929
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AA seq
363 aa
AA seq
DB search
MAMDSSTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKVAADQLAVRQKRRIYDITNVLEG
IGLIEKKSKNSIQWKGASANYSGTEDGVNQGNGNSSEISDRLLILKQEIDDLEQQEKRLD
LHKSWVQQSIKNVTDEVTNTQAAYVTHEDICRSFKGDTLLAIQAPSGTQLEVPIPEVGPG
FKKSYQMHLKSQSGPIHVLLVNKDTEETSPVVVQVPPPKEEDESQNVDPNQATSKAKLVK
RSHQKSPLRPSQSSSDVEYPTRMSTRSSPRKQGQTSQSVPSTSDAQTTLDSLPSDILFDP
NDPRHSGLDIPSEGDLIEELMSSEAFAPLLRLSPPPSDRDYYFNLDDTEGACDLFDVPLL
TNY
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggatagttcaacgccaagtcggcacgagaaaagcttgggactgctgaccaca
aagtttgtgtcattattgcaagaggcaaaggacggggttctagacctaaaagttgctgct
gaccaactagctgttagacagaagagaagaatatatgatattaccaatgtattagaaggc
attggtctgattgagaaaaaatccaaaaacagtatccagtggaaaggtgccagtgccaat
tactctggaacagaagatggtgtgaaccagggaaatggcaacagttcagaaatatctgac
cggctgctgatattgaagcaggagattgatgatttagaacagcaagagaagagactagac
ctacacaagtcatgggttcagcagagcataaaaaatgtcacagatgaagtcaccaataca
caggcagcttatgtcacacatgaagacatttgtaggagctttaaaggagacactctatta
gcaatacaagctccatcaggtacccaactagaggtacccatcccagaggtgggtcctggt
tttaagaagagttaccagatgcatctgaagagtcagtctggtcctatccacgttctcctg
gtgaacaaggacacagaggagaccagtcccgtggtggtgcaggtgcccccacccaaggag
gaggacgagagtcaaaacgtcgaccccaaccaagccaccagcaaagccaaacttgtcaag
cgctcacaccagaaatctccattacgtccctcacagtcctcatcagacgtagaataccct
acccgcatgtcaacaaggtcgtcgccacggaaacaaggacagacgtcacaatcagtgcct
tccacttctgatgctcaaactaccttagattctcttcccagtgacatcttgtttgacccc
aatgatcctcgccattcaggtctagatataccaagcgagggagatttaatagaagaactg
atgtcttccgaagcctttgcccctctccttcgactgagtcccccaccttcagacagagac
tattatttcaatctggatgacacggagggtgcgtgtgatctgtttgacgttcccttactg
accaattactga
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