Crassostrea virginica (eastern oyster): 111135441
Help
Entry
111135441 CDS
T09197
Name
(RefSeq) transcription initiation factor TFIID subunit 10-like isoform X1
KO
K03134
transcription initiation factor TFIID subunit 10
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111135441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111135441
03036 Chromosome and associated proteins [BR:
cvn03036
]
111135441
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111135441
Coactivators
SAGA/TFTC/STAGA complex
111135441
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111135441
STAGA complex
111135441
TFTC complex
111135441
SAGA complex
111135441
SLIK complex
111135441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF10
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
111135441
NCBI-ProteinID:
XP_022341226
UniProt:
A0A8B8EF44
LinkDB
All DBs
Position
5:complement(19845969..19860766)
Genome browser
AA seq
139 aa
AA seq
DB search
MNTESDDTGQTTGGGSTPGMTPTASAATPSQDKTAGVPLTDFVQQLEDYAPTIPDSVTAF
YLNRAGFEASDPRITRLISIAAQKFISDIANDALQHCKMKSSVQSKNKGKDKKLTLTMDD
LTPALAEYGINVKKPSYFI
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagaatcagatgatactggacaaactactgggggtggttcaactccaggaatg
acccccacggcttctgcagccacaccctcccaagacaaaacggcgggggtacccctgaca
gactttgttcaacaattggaggactacgcccccacgattccagactccgtcacagcattt
tatctgaatcgagctggattcgaagcttcagatccccgaataacacgattgatttctatt
gctgcccagaaatttatttccgacattgcaaatgatgcactgcaacactgcaaaatgaaa
agctctgtacagtccaaaaataaaggaaaggataaaaagctaacactaactatggacgac
ttgacaccagccctggcagaatatggcattaatgtgaaaaagccttcatactttatctga
DBGET
integrated database retrieval system
