KEGG   Crassostrea virginica (eastern oyster): 111135550
Entry
111135550         CDS       T09197                                 
Name
(RefSeq) RNA-binding protein 39-like
  KO
K13091  RNA-binding protein 23/39
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvn03041]
    111135550
Spliceosome [BR:cvn03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    111135550
SSDB
Motif
Pfam: RRM_1 RBM39linker RRM_occluded RRM_7 RBD_DEAH11 Nup35_RRM_2 RRM_PARP14_3
Other DBs
NCBI-GeneID: 111135550
NCBI-ProteinID: XP_022341412
UniProt: A0A8B8ENC4
LinkDB
Position
5:57124153..57131101
AA seq 548 aa
MADDLDVEAMLEAPYRKEDDGRGDADRDREKRKKRSSDRDRDRDRDRDRDRDRDRDRDRE
RRRSRSRDKHRDRDRDRDRHRDHERHRGRDRDRERRERKRSRSREKRRKSRSKSKERKKS
RSPERERRPRSNSKSPMRYIRQPGPELTPEERDARTVFCMQLSARIRPRDLEEFFSSVGK
VRDVRLIMDNKTRRSKGISYVEFQDTDSVPLAIGLTNQKLLGVPIIVQHSQAEKNRVGNP
TSILTKGNIGPMRLYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFITF
HDSEDAKKALEQLNGFELAGRPMKVGHVTERQGEIQGASMLDSDEMDRAGIDLGATGRLQ
LMAKLAEGTGFQIPEYAASALNITQQAPGLAPVSAPGASPNVSAILGSQAPGQDSTAPPI
ATQCFMLSNMFDPTAESRSSWDQEIRDDVIEECNKHGGVLHLYVDKASPQGNVYVKCPTI
SAAVASVRALHGRYFGGKMITAAYVPLPNYHSLFPDAVRANQLLLPSTQALQAGYPTNMF
AAVQPVIR
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcagacgatttggacgttgaggctatgttggaggcaccctacaggaaagaggatgac
ggaagaggagatgcagatagagacagagaaaagaggaaaaagagaagtagtgaccgagat
cgagacagggacagggatcgagatagggatcgagatagagatagggatagggatagagag
cgtagaaggagtaggagtcgggacaaacatagggatcgagacagagaccgagacagacac
cgagatcatgagagacacagggggcgagatcgagaccgagagcgtcgagaaagaaagcgt
agtagaagtcgagaaaaacgcaggaaaagccgtagtaaatcaaaggagagaaagaaaagc
aggtccccagagagagaaagaaggccaaggagcaatagcaaaagccctatgagatacatc
agacaaccaggtcctgagcttacaccagaggaaagggatgccaggacagttttctgtatg
cagttgtctgctagaatcaggcccagggacttggaggaattcttttcatctgttggaaag
gtccgagatgtaagactaattatggataacaagacgaggagatcaaaaggcatttcctat
gtggaattccaggacacagattcagtaccactggcaatcggactaacaaaccagaagcta
ttgggtgtccccattattgtgcagcactctcaggcagagaaaaatcgagtgggaaaccca
actagcattttaacaaagggaaacattggacccatgaggctatatgttggctctttgcac
tttaatatcactgaggaaatgctcaggggaatatttgagccatttggaaagattgatgac
attaaattgatcagagaccatgaaacaaacagatcacagggctatgggtttataacattc
catgactcagaggatgccaagaaagccttggaacagctgaatggctttgagctggctggt
cgtccaatgaaagtaggtcatgtgacagagagacagggcgagattcagggtgcttccatg
ttggacagtgatgaaatggatcgggcagggatagacctgggagcaactggtcgtctacag
ctgatggccaaattagcagaaggtacggggttccagattcctgagtatgctgcttcagca
ctaaacataacacagcaggcccccgggttggcaccagtttctgctccaggggccagccct
aatgtgtccgccatacttggcagtcaagccccaggacaagacagtacagctccgccaata
gccacccagtgttttatgctatccaacatgtttgatccaactgcggaatcccggtcaagc
tgggaccaggagatccgtgacgatgtgatagaagaatgcaacaagcacggaggagtcctg
catctgtatgtggacaaggcctccccccaaggaaacgtgtatgtcaagtgtcccacaata
tccgcagctgtggcctctgtcagagctctccatgggagatactttggaggcaagatgatt
acggcagcctatgtacccctccccaactatcactccctgttccctgacgccgtcagggct
aaccagctcctgctgccctccacacaggccctgcaggctggctaccccaccaacatgttc
gccgcggtgcagccagtgataagatag

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