Crassostrea virginica (eastern oyster): 111135570
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Entry
111135570 CDS
T09197
Name
(RefSeq) retinoic acid receptor alpha-like
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111135570
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvn03310
]
111135570
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111135570
Nuclear receptors [BR:
cvn03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
111135570
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111135570
NCBI-ProteinID:
XP_022341462
UniProt:
A0A8B8ENH3
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Position
1:complement(58028170..58044082)
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AA seq
513 aa
AA seq
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MDAESGGSALSSPSGPTTMSEGASPQERKIEDIKEEDMYSNEHGSYMPCFTPESEENMEF
VSQTSLRVDSTSEKFKVTVKRPCSSTTDDVMTTSPAYSGGDSCQASPDSALQPTPSSSSS
TPLLPPCRVCGEKASGFHYGVNTCEACKGFFRRSLRRKTEYKCVKSDRSCTIAPGKRNGC
PLCRYNKCLAVGMSKEAIKTGRYTHEKRTRDIREIKRLQNQVEVKEEVKESPSEAHEKTI
IVNEEFERLAEHMDNAQKTMYGPLLGFWTNQKAIFKLTNDYAEAFRLKLEMFGSMNNLSK
EEYQQFYSQTGIDLDNRLMLVTNFASNMEKNITKFVTFTKTIPGFATLPLEDQASLVKSS
RFEFWIFGFWKFINTEMKVLTGPARNCYHSSELCNVWDKDFVVALFNFAQTLHNLQMTDM
EIALVRCICLTYTDRCELKNPEKVEEIQWKMLMCLQYVVEKNHNNSERYFSRIMDRLAAV
RNLTDWSNKIAQEVKLDWPILQRHPLLLEMMSM
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgagagtggagggtcagccctgtcgagcccctcagggccaaccaccatgtct
gaaggggccagtccacaggaaaggaaaatagaggatatcaaagaagaggacatgtacagt
aatgaacatgggagttatatgccctgcttcacaccagaatctgaggaaaatatggagttt
gtatcccagacctctttgagagttgattccacttcagagaaattcaaagtgactgtgaag
aggccttgtagtagtaccactgatgatgtcatgacaaccagcccagcctacagtgggggt
gattcctgccaggctagcccagactccgccctgcagcccaccccctcctcctcctcctct
acccctctactccccccttgtagagtctgtggggagaaagcctcaggattccactatggt
gttaacacctgtgaagcctgcaaaggattttttcgccggagtttaaggagaaagacagaa
tataaatgcgtgaagagtgacagaagctgtacaatagcgccaggcaagagaaatggctgc
ccgttgtgtcgctataataaatgtttggcggttggcatgtctaaggaagcaattaagact
ggaagatatactcacgaaaaaagaacccgagatattagagaaatcaaaagattacagaat
caggtggaagtaaaggaggaagtgaaggagagtccatcagaggcccacgaaaagacaatc
attgtcaatgaggagtttgaaagattggcagaacacatggataatgctcagaaaacaatg
tatggacccctcctaggtttttggaccaatcaaaaggctatttttaaactgaccaatgat
tatgcagaagcattcagattaaaattggagatgttcggaagtatgaacaacctgtctaaa
gaggaataccagcagttctacagccagacaggcatcgacttggacaacagattgatgttg
gtcactaactttgccagtaatatggagaaaaacatcactaagtttgtgacctttactaaa
acaatcccaggctttgcaactcttccactggaagatcaggccagtctcgtcaaatcctca
aggtttgaattttggatatttggcttctggaagttcatcaatacagagatgaaagttcta
accggtccagccagaaactgttaccactcatcagagctttgtaatgtatgggataaagac
ttcgtggtggctctttttaattttgcccagactttacataatcttcagatgactgacatg
gaaattgccctggttcgatgcatttgccttacatacacagatcgatgtgaattaaaaaac
cccgaaaaagtagaagaaatccagtggaaaatgcttatgtgtctgcagtatgtggtagaa
aaaaatcacaataattctgaacgctacttttcacgcataatggacagattggctgccgtg
cgaaatcttacagactggagtaacaagattgcacaggaagtgaagcttgattggccaatt
ttacagagacatcctcttctcctggagatgatgtcaatgtga
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