Crassostrea virginica (eastern oyster): 111135732
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Entry
111135732 CDS
T09197
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111135732
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvn01009
]
111135732
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111135732
03036 Chromosome and associated proteins [BR:
cvn03036
]
111135732
Protein phosphatases and associated proteins [BR:
cvn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111135732
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111135732
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111135732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
111135732
NCBI-ProteinID:
XP_022341750
UniProt:
A0A8B8EP95
LinkDB
All DBs
Position
5:62102312..62109544
Genome browser
AA seq
445 aa
AA seq
DB search
MAGNVGDIQWCFSQVKGAIETDDVTEADIISCVEFNSTGDLLATGDKGGRVVIFQRDKAG
KIAIPSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLKRTNPANFLLSTNDKTIKL
WKVTERDKRPEGYNLKDESGLMRDPTNLTSLRVPSFKPMELMVEASPRRIFANAHTYHIN
SISVNSDQETYLSADDLRINLWHLEVTDQSFNIVDIKPANMEELTEVITAAEFHPHECNL
FVYSSSKGTIRLCDMREQALCDKHAKLFEEPEDPTNRSFFSEIISSISDVKFSHNGRYMV
TRDYLSIKVWDLLMETKPIETYQVHEYLRSKLCSLYENDCIFDKFECSWSGDDRHIMTGS
YNNFYRMFDREGKRDTTLEACRENMKPRTILKPRKVCTGGKRKKEEINVDCLDFNKKILH
TAWHPLENILAVAATNNLYIFQSKD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaatgttggagatattcagtggtgcttttcgcaagtaaagggcgccatagaa
actgacgatgtcacggaagctgacataatttcctgtgtggagttcaacagcacaggtgac
ctacttgcaacaggagacaaagggggacgtgttgtcatcttccaacgtgataaagcaggg
aagattgcaataccatctagaggggagtacaatgtgtacagcacatttcaaagtcatgag
ccagagtttgactacctcaaaagtttggagattgaagagaaaatcaacaaaataagatgg
ctaaagagaacaaatcctgctaatttcttgctttccactaatgataagaccatcaagctg
tggaaggtgaccgagagagacaagagacctgaaggttacaatctgaaagatgaatctgga
ttgatgagagaccctaccaacttgacaagcttgagggtccccagcttcaaaccaatggag
ttaatggtggaggccagtccccgtcgtatatttgcgaatgcccacacttaccacatcaac
tcaatctctgtcaacagtgaccaggaaacatatctgtcagctgatgacctgcgcattaac
ctttggcatttagaggtcacagaccaaagcttcaatattgtggacataaagccagccaat
atggaggaattgacggaagtgattactgctgctgaatttcaccctcacgagtgcaacttg
tttgtatacagcagtagtaaaggcactatacgtctctgtgatatgagagagcaggcttta
tgtgataaacatgctaagttgtttgaggaaccagaagatcccaccaacaggagtttcttt
tctgagattatatctagtatatcagatgtgaagtttagtcataatggacgttacatggtg
actcgcgactacttgtccatcaaagtctgggacttgttgatggagaccaaacccatagaa
acttatcaagtgcacgagtacctcaggagtaaattatgttctctgtatgaaaatgactgt
atttttgacaaattcgagtgttcgtggagtggagatgataggcacattatgacaggatct
tacaataatttctatcgcatgtttgaccgggaagggaaaagagacacaactttagaagca
tgtagagaaaacatgaaacccaggacaattttaaaaccgcgtaaggtgtgtaccggtggg
aagaggaagaaggaggagatcaatgtggactgtctagatttcaataaaaagatcctccac
acagcctggcaccccctagaaaacatcctagccgtggcagccaccaataatctatatatc
ttccaaagtaaagattaa
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