Crassostrea virginica (eastern oyster): 111135802
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Entry
111135802 CDS
T09197
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111135802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111135802
03032 DNA replication proteins [BR:
cvn03032
]
111135802
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
111135802
Prokaryotic type
111135802
DNA replication proteins [BR:
cvn03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
111135802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
Pus10_C
UPF0113
Motif
Other DBs
NCBI-GeneID:
111135802
NCBI-ProteinID:
XP_022341890
UniProt:
A0A8B8EPM9
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All DBs
Position
5:68967004..68972786
Genome browser
AA seq
498 aa
AA seq
DB search
MAEIEHKKKKRKSGTVDVAEVQHSESFLLKPSTVVEQLDTSQWPLLLKNFDKLNVRTAHY
TPIPAGYSPLKRPIQEYLKSGFINLDKPANPSSHEVVSWVKRILRVQKTGHSGTLDPKVT
GCLIVCIERATRLVKSQQGAGKEYVCIFKLHSAVEDEKLVAQKIEMMTGALFQRPPLISA
VKRQLRIRTIYECKMREYNKEDAMGIFWVSCEAGTYIRTMCVHLGLFLGVGGQMQELRRV
RSGIMSEKSNLYTMHDVMDAQWTYDHHKDESYLRRVINPLEALLTSHKRIIMKDTAVNAV
CYGAKIMLPGVLRYEDGIEVNDEIVIVTTKGEAVALAIAQMTTAVMATCDHGIVAKIKRV
VMERDTYPRKWGLGPVAMKKKKMIQEGTLDKFGKPNEKTPANWKKGYEDFNIKKEVVEDG
PANGNTGKRKKEATSSDESEPPSPKPVENEESEKKKKKKKKKDKDQEVDEAGDAGEESPE
KKKKKKKKHKKMKTEESE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatcgaacataagaaaaagaagaggaagagtggaactgttgatgttgcagaa
gtccagcactctgaaagtttcctcctaaagccgtcaacggttgtagaacagttggacacc
tcacaatggcctctattgcttaagaattttgacaaactgaatgtcagaacggcacactac
actcctattccagcaggatactccccactgaaaagaccaatacaagaatatcttaaaagt
ggatttataaatcttgacaagccagcaaatccctcatcacacgaggtcgtatcatgggtg
aagaggattctgcgtgtacagaagacgggtcacagtggtacgctggatcctaaggtcaca
ggttgtcttattgtctgcatagaaagagccacacgactggtcaaatcacagcaaggagct
ggaaaggagtatgtgtgtatcttcaaactccatagtgctgtggaggatgaaaaactggtt
gctcagaaaattgagatgatgacaggagcattatttcagagacctcccttgatttctgct
gtaaaaagacagcttagaatccgcactatatatgaatgcaagatgcgtgaatacaacaaa
gaagatgcaatgggtattttctgggtgagctgcgaggctggcacatacattaggaccatg
tgtgtacatctgggcctctttttgggggtcgggggtcagatgcaggagctcaggcgagtc
cgctctggtatcatgtctgagaagtctaatttgtacaccatgcatgatgttatggatgcc
cagtggacttatgaccatcacaaggatgagtcttatcttcggcgagtcatcaacccatta
gaggctttgttaacatcacacaaaagaatcattatgaaagacacagccgtaaatgctgtg
tgttatggtgcgaaaatcatgttacctggtgtgctgagatatgaagatggaattgaagtt
aatgatgaaatagttatagtgacaacaaaaggggaagcggtcgctcttgccatcgctcaa
atgacaacagcagtcatggctacttgtgatcatggaattgttgccaagatcaaaagggtt
gtcatggagagggacacgtatccaaggaaatggggactgggcccagtggccatgaagaaa
aagaaaatgatacaggagggcacactggataaatttggcaaaccaaatgaaaaaactccc
gcaaactggaagaaaggctatgaggatttcaatatcaaaaaggaggttgtagaggatggc
ccagctaatggaaacactggcaagagaaagaaggaagctaccagttctgatgaaagtgag
ccaccttcacccaaacctgtggagaatgaagaaagtgaaaagaagaagaagaaaaagaag
aagaaggacaaagatcaagaagtggatgaggctggtgatgctggagaggagtccccagaa
aagaagaagaaaaagaagaagaaacacaagaaaatgaagactgaggagagtgaatga
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