Crassostrea virginica (eastern oyster): 111135857
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Entry
111135857 CDS
T09197
Name
(RefSeq) F-box/WD repeat-containing protein 1A-like
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04120
Ubiquitin mediated proteolysis
cvn04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111135857
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111135857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111135857
03036 Chromosome and associated proteins [BR:
cvn03036
]
111135857
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111135857
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111135857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
EIF3I
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_DCAF12
F-box
Beta-prop_IFT140_1st
WD40_like
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR11_2nd
Beta-prop_WDR19_1st
WD40_2
KNTC1_N
Frtz
EIN3_DNA-bd
F-box_5
Motif
Other DBs
NCBI-GeneID:
111135857
NCBI-ProteinID:
XP_022341985
UniProt:
A0A8B8EPX4
LinkDB
All DBs
Position
5:complement(62301519..62315564)
Genome browser
AA seq
524 aa
AA seq
DB search
MSSMETKMETCSSIDDRSERKLDTDAQIRSLQAEPQKNSEQYLKDRDSCTKFFDNWTETD
QITFVEHLLLRMCHFQHGQINTFLKPMLQRDFISALPAKGLDHVAENILSYLDAKSLCAA
EAVCKEWYRVISEGMLWKKLIERMVRTDTLWRGLAERRGWGVYLFKGKAGDTPTDHKFYR
NLYPQIIEDIERIETNWRTGRHTLQRIHCRSETSKGVYCLQYDETRIISGLRDNTIKVWK
SKMIWDRNTLECVQVLTGHTGSVLCLQYDENIIISGSSDSTVRVWDVHTGEMLNTLIHHC
EAVLHLRFCDGIMVTCSKDRSIAVWDMQSPTEINLRRVLVGHRAAVNVVDFDEKYIVSAS
GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDCLVVSGSSDNTIRLWDIESGACLRTLE
GHEELVRCIRFDNKRIVSGAYDGKIKVWDLAAALDPRSPAGSLCLRTLVEHSGRVFRLQF
DEFQIVSSSHDDTILIWDFLNVPIETSSTSSSRSPTRTYTYVNN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagctctatggaaacaaaaatggaaacctgtagttccattgatgatagatctgaaagg
aaattggatactgatgcccagattcggtcgcttcaggcagaaccccagaagaactcggag
cagtacttaaaagacagggacagttgtaccaagttttttgacaactggacagaaactgac
caaattacatttgtcgaacatttgttattacgcatgtgtcattttcaacatgggcaaatt
aacactttcctgaaacctatgttacaaagagatttcatctcagcattaccagcaaaaggt
ctagaccatgtggcagagaacattctttcatacctggatgccaagtcgctgtgtgcagct
gaggcagtgtgtaaggagtggtatcgagtcatatccgagggcatgttatggaagaaactc
attgagaggatggtacggaccgacaccttgtggaggggcctcgccgagaggagaggatgg
ggagtgtatttgttcaagggaaaagcaggggacacacccactgatcacaagttttacaga
aatttatatccacaaatcatagaggatatagagagaatcgagaccaactggcggaccggg
cgccacaccctccagaggatccactgcaggagcgagaccagcaagggtgtgtactgtctc
cagtacgacgagacccgcatcatcagcggcctgagggacaacaccatcaaagtctggaag
tccaagatgatatgggatcgtaacacattggagtgtgtacaagttttaacaggtcacact
ggttcagtgttatgcttgcagtatgatgaaaacattattatatccgggtccagcgactcc
actgttagggtctgggatgtccacactggcgagatgctgaacacactgattcaccattgt
gaggccgtccttcacttaaggttctgtgatggcattatggtcacttgttcaaaagatcgc
agcatagctgtatgggatatgcagtcccccacagaaatcaatttacgccgagtgttagtt
ggacatcgagccgccgtcaatgtggtggactttgatgaaaaatatattgtatctgcctca
ggagaccgcacaatcaaggtttggagtacatcaacttgtgaatttgtacgaacattaaat
ggacataaacgtggcattgcatgtctccagtaccgtgattgtctcgtagtcagtggcagc
tcagacaatactattaggttgtgggacatcgagagtggagcgtgtctccggactctagaa
ggccatgaggagttggtgcgctgtatccggttcgacaacaaacgtatcgtcagtggagcc
tatgatggtaaaatcaaggtgtgggacctggctgcagccttagatccccgctctccagcc
ggcagtctatgtctcaggacgctagtggagcattcagggcgcgttttccgccttcagttt
gacgagttccaaattgtcagtagttctcatgacgacaccattctcatttgggactttcta
aatgtgccaatagaaacttcatctacgtccagttcccgctctccaacgcgaacctacaca
tatgtgaacaattga
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