Crassostrea virginica (eastern oyster): 111135915 Help Entry 111135915         CDS       T09197                                  Name (RefSeq) rotatin-like isoform X1   KO K16484   rotatin Organism cvn  Crassostrea virginica (eastern oyster) Brite KEGG Orthology (KO) [BR:cvn00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:cvn03037]     111135915 Cilium and associated proteins [BR:cvn03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    111135915 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RTTN_N DUF383 TPR_Trm732_C Ribosomal_S2 Motif Other DBs NCBI-GeneID:  111135915 NCBI-ProteinID:  XP_022342103 UniProt:  A0A8B8EQP4 LinkDB All DBs Position 5:complement(33837750..33862351) Genome browser AA seq 2239 aa AA seqDB search MASQTRQDINFQGIFKKLGHNLEEIRVRSLENLLSKLEHNLVCDSDLVNERHLMIRLIEW FNFPSPPKQGDVLNLILRLSKHSAAAQILQDVGAIEFLSQLRSDVPKSLQPVIDQILENT MRLPEVSDETLSPTCTYQRKGFSAASETRTEFTVSDSAPEIAPSITTVSSVPSQDLMEQP HIITGRENSDGYFKDKVHLLQEQQRDTSDGISSTFLTTTFPWLALTSTDRHVIQSTNSSL QSRESHLLASSCEFLSDVVFHDFPAEIFLQRPNIIRNLLALLGAVPNVNTHLTIHAAKTL GDLTASLRSRLRYYQDPSLFTTKQDFSSSSSSPFSNSPSMLSNQSGRSDSHSPLAGWSDT RPRGDGREVDSSSSVSSNSRNSSVSMGHDATNPEETDIDDMRSLQSMQITLPQYCSLVLE KAVPLLKTGVEAVVTQLMYLLNQVLEIFASIVTMELWQDTSPRAREIAERVSGTLEALGD VINFHHHGENSRGNPEKDKGDIVQHRLAFIGVTGFTSRLLKQLVPIQQGRKLLPGTLVKS LELVVFDEALSHSYPDIQITLLAYLQNLSPDKYQLFVDTAKICQSIQKSCQFLMLCQEEA YKGSSEMIDMAEASLQSLPYHLHLPLISEFIKLSSSICARTSENQALQMKCVHVLLKFLS HPLPEVKEQTYNTVKQVIKGSLNVTEAADPSSRACYLSRFLFHSDIVYEITVFGLNDSNP KVSQTGTDIICHILDAQLLMTEDLWKEALSSLMKSLPVLQTYVDMGSKLGSTLLAMIDPT EAQSEGGLVYLEKLRGCLRMMFSTDVRARAEALKRLAWFLSNEHDSNEKLPIFASLDVTN LTSIFIMEPQRSLDEDLGRSVFQIDGMRKVYEIFNSTSVDPSVKKSAVDQLAIILQDHNL HAPFKAEGGVETVLKHLKLGLSRRDDVQSEFLYYLPACAAILRSLIHYDYKLRHKLAREQ DIYLVLLRVAFLHQRDERTRYEVAHILILLLFDEVAKFDLGGGTKPVIHFSIPSVLKKRS RLPFRPACHHDKSPHMVELPPDLDPIQTDKPLEMLRVSWNVAWHGGMEKLLKYLSQNKNG SKNDKTTEFSPRLQLSFTERKIVQCSHLAEGVKQTLYSVSNATSHNAVSAALGQLLSYLV NSHGYSGSEVMFSQEWLSSIGRFLKVHPSMPDDESLLQEVLRFISMALRLTTEVSEGTLQ ALGEALYQPSGPLIGLSHRTSVRGETRDVPENVNIKRTLDKELLSFISTYNCKLPYVLCR RLKFHQLRGDLCHQLLQRLNVTDAPHFYNLASLEGTLQCLMHVTARPDWSRESTEFGGEA LCSQLLSCLLEIVSAFHIGRGGTSMSYMGKGVTKAATMCLRHLVYEMASTAENKKWAEQW IYVQQRADGQNGVEVEERRGLDWLLTLWSYRDPEVRVAGLGIGVAMTSTDCGRTVLTSHC THIPGGVWGVAFSILLDQSECSMVRQQAALLLVNMTSQSMPCGSVELEENVWQGPVVADT ESKVSLVGLTALLALLHHSHFYQEMLVVFTNFYAQPTIQHVSAADLMMSSQLSSASSEST MSTTADFTSVSQQGQPLWSRGGGDSRGNGRASTRNVQTGVIQQAADSSGSTLMAGEGGSD ISVATPSLVAAISQLLRNLLILAPQDTFTSLKQDSFVQILMNMVDTNLLEAYMLEMEGHV SYDQYEIVFGDLLEMYGAVMSLLTACVVYDTPTRQDILTNTDFIRSALALMTIKFQGSSD VESRLHDLWGSVLMFFVTNLQLQGASTLAVMTECLPKIWASFCDNLCNILSKRLDHGHSL FSKCLQFLSALFSEEGKLQGRQLDLSNTTITELVDTSSGSEDKDCNSPGCQLCKALVPVY EQMVVRSSDHTNVDRNHAAGSLRNLLAVSQRAKLTALQMGFVETTIENIKQLHSKMNLEA LQLGKTVGKKREDSLVPDLIITLDVLRNLLYMNEDAKMACYHSGLPAIIHKIWPWCQMEP QLMLSAVSLLSTYAAKCLTATSSLAYTSPSSTSTTQNVRSSSQQLGANSLVHCLLKLAGR DGIREPLLKSLYGLLATLSLSSECRNIMFKSNFFREFTELNPRKPKKSKKAKSLEVYWLE LILNLSFSTEGQQMILKTGDSVDLLLDFVDSGNEPTLEYSVLIIRNMCCHCSSKPKLLAN DKLLPLLLGCLNKESVKVQTIAASALLGLVFNNQKAKVMMKNANLLPKLQETLSNLNNLQ TTPEKCVQDLTSVLIAVSE NT seq 6720 nt NT seq  +upstreamnt  +downstreamnt atggcatcgcaaacacgacaggacataaattttcagggaatcttcaaaaaattaggtcac aatttggaagaaattagagtaagaagtcttgaaaatcttctttcaaagcttgagcataat ctagtatgtgactcggatcttgtaaatgaacgtcatctgatgatcagattgattgaatgg tttaattttccaagtccgccaaagcaaggagatgtgcttaatctcattttgaggttgtca aagcattctgctgctgctcaaattcttcaagatgttggagcgattgaatttttgagccag ttacgatcagacgtcccaaagtctttacaacctgttattgatcaaatccttgaaaataca atgagattgccagaagtgtctgatgaaactttaagtccaacctgtacctatcagaggaag ggctttagtgcagcttcagaaacaagaacagagtttactgttagtgatagtgcccctgaa attgccccatcaataacaacagtctcatccgtgccatctcaagatcttatggagcagcca cacataatcacagggcgagagaattccgatgggtacttcaaagataaagtacatctgctt caagagcaacagagagatactagtgatggtatttcaagcacatttctgacaactacattt ccttggttggcattaacttctacagacagacatgttattcagtccaccaattcatcactt caaagtagagaatcacatttactggcaagttcctgtgagtttttgagtgatgtggtgttc catgattttcctgctgaaatatttctacaaagacctaacattatcagaaatctgctagca ctacttggagctgttccaaatgttaatacacacctgactatccatgcagcaaaaactctt ggagacctaactgcttctttgaggtcaaggttacgatattatcaagatccgtctttgttc acaactaagcaagatttcagttcctcttcctcctctccattttccaactcgcccagtatg ttgtccaaccagtcaggaaggtcagacagtcacagcccgttggctggctggagtgacact cgccccaggggtgatggcagggaggtagactcctcttcatcagtaagttcgaattcccgt aactccagtgtgagtatgggacatgatgcaacaaaccccgaagagacagacattgatgac atgaggtctctacagagcatgcagatcacccttccccagtactgctccttggtcctagag aaggcagtccccctccttaagaccggggtggaggctgttgtcacccagctcatgtatctc ctgaaccaggtgctggagatctttgccagcattgttaccatggaactttggcaggacaca tcccctagagcaagggaaatagctgaaagagtatctggaacattggaggctttaggggat gtgattaattttcaccaccatggagagaacagtcgtgggaatccggagaaagataagggt gacatcgtacagcaccgactggcttttataggagtgacaggattcacctctcgactcctg aagcaactggttccaattcaacagggaagaaaactcttgcctggtacacttgtgaagtcc ctggagttagtggtgtttgatgaggctctgtctcacagttacccagacatccagataaca ctcctggcctacctacagaacctgagtccagataaataccagctgtttgttgacacagct aaaatctgccagtccatccagaagtcttgtcagttcctgatgctctgtcaggaagaggct tacaaaggcagcagtgagatgattgacatggcagaagcttccctccagagcctcccctac cacctccatctcccgctgatctcagaattcatcaaactctcctcctccatttgtgcaaga acatcagagaaccaggctttacagatgaagtgtgtgcatgtcttgctcaagtttctatct catccactgcccgaggtcaaagagcagacctacaacactgtcaaacaggtcatcaagggc tcgctgaatgtgacagaggcagcagaccccagctccagagcgtgttacctatctcgcttc ttgttccactccgacatcgtgtatgagattacagtgtttgggctgaatgacagcaacccc aaggttagccagactggcaccgatatcatctgtcacatcttggatgctcagttattgatg acagaagatttgtggaaggaagctctcagcagtcttatgaagtcccttcctgtcttacag acatatgttgatatgggatcaaagcttggatccacacttctggccatgattgatcctact gaggctcaatcagaagggggactagtttacctggagaagctcaggggctgtctcagaatg atgttttctacagatgttagagctagagcagaggcgttaaagcgactggcctggtttttg tcaaacgaacatgacagcaatgagaagctgcctatatttgcttcacttgatgtgaccaac ctgaccagtatttttatcatggagccgcaaaggtcacttgatgaagatcttggcagatct gtgtttcagattgatggtatgaggaaggtgtatgagatctttaactccacctctgtagac ccctcagtcaagaagtcagctgttgatcagctggccatcattctacaggatcacaatcta catgccccgtttaaagcagagggaggggtagagacagtcttaaaacacctaaagctgggc ctgagcagaagagacgatgttcagagtgagttcctgtactacctgcctgcatgtgcagcc atcttgagatctctaattcactatgattacaaactgagacacaaacttgctcgagagcaa gatatttatcttgtattgctcagagttgcttttctgcatcagagagatgagagaactcgc tacgaagtggctcatatactaatacttctgttatttgacgaggttgcaaagtttgatctt ggtggaggaactaagccagttatacatttttccattccaagtgtgctgaaaaaaagaagt cgcctcccttttcgccccgcttgtcatcatgacaagagtccccacatggtagaactgcct cctgaccttgacccaatccagacagacaaacccttagaaatgctccgtgtctcgtggaat gtggcctggcatggtggaatggaaaaacttctcaaatacctctctcagaataaaaatggc agtaaaaatgacaagactacagagttttcccccagactgcagctgagtttcactgagagg aaaatagttcagtgtagtcatttagcagagggagttaaacagacactctacagtgtatct aatgccacttcccataatgctgtgagtgcagccctaggccagctgcttagttaccttgtc aattcacatggatattcagggtcagaggtcatgttcagtcaggaatggctctccagcatt ggcaggtttttgaaggtacacccatcgatgcctgatgatgaatctcttttacaagaagtt ctacggttcattagcatggctttaaggctgactactgaggtatcagagggcaccttgcaa gctctaggagaggccctatatcaaccatcaggacctcttattggactatctcataggacc tcagtcagaggagaaaccagagatgtaccagaaaatgtcaacattaagagaaccctggat aaagagctgttgtcatttatttcaacatacaattgtaaacttccctatgtactgtgtaga agattaaagttccatcaacttcggggagatctctgtcaccagttgttacagcgccttaat gtcacagacgccccccacttctacaacctggcctcgttagaggggaccctgcagtgcttg atgcatgtcactgccaggccagattggagcagagagagcacagagttcggaggagaggcc ctctgtagtcagctgttgtcctgtctcctagagattgtgtcagctttccacattggccgt ggagggacatccatgtcttacatggggaagggtgttacaaaggctgccaccatgtgtctg aggcatttagtgtatgaaatggcatctactgcagagaacaagaaatgggccgagcagtgg atatatgttcagcagagagctgatggacagaatggtgtagaagtggaagagaggcggggt ctggactggttgttgacactgtggtcgtacagggacccagaggtaagagtagcaggactt ggtattggagtagccatgacctcaacagactgtggtaggactgtgttgacctcacactgt acacatatacctggtggagtatggggggtagcgtttagtatccttcttgaccaatcagaa tgcagcatggtaagacagcaagcggctttacttttggtgaacatgacttcacagtcaatg ccctgtggcagtgtggagttggaggagaatgtatggcagggacctgtagtagcagacaca gagtccaaggtatccttggttggactgactgctcttctagccttacttcaccacagccac ttttaccaagaaatgctggttgtgtttacaaacttttatgcccagccaacaatacagcat gtatcagccgctgacctgatgatgtcatcacaactgtcgtctgctagctctgaatccacc atgtccactacagctgattttacttctgtaagtcaacaggggcagccattgtggagtaga ggagggggggattctcgaggtaatgggagagccagcaccaggaatgtccagacaggtgtg attcagcaggcagcagacagctcagggagtaccttgatggcaggagaggggggaagtgac atcagtgtggccacaccctctttggtggctgccatatctcaactattacgcaacctgctc attctagcaccacaagatacattcacaagcctaaagcaagactcattcgtgcaaatcctt atgaatatggttgacaccaacttgttagaggcgtacatgttggaaatggagggccatgtc agctatgaccagtacgagattgtgtttggggacctgctggagatgtatggggcggtgatg tcccttctgacagcctgtgtagtgtatgacacgcccaccagacaagacatcctaaccaat acagacttcatcaggtctgccctggccctaatgaccatcaaattccaaggttcctctgat gtagaatccaggcttcatgatttgtggggcagtgtattgatgttctttgtcacaaaccta caactgcagggagcctcgactttagcagtaatgacagaatgcctgcccaaaatatgggca tctttttgcgacaacttgtgtaatatcctatcaaagagactggatcatggacatagtttg ttctcaaaatgtctgcaattcctttctgcactgttcagtgaagagggtaaactgcagggg agacaacttgatctttccaacacaaccataacagaacttgtagacaccagctcaggtagt gaggataaggattgtaatagccctggctgtcaactttgtaaggctttggtgcctgtgtat gaacagatggttgtgcgatcttctgatcacacgaatgtggatcgaaatcatgctgcaggt tccctaaggaacctcctggcagtcagccaaagggctaaacttacggctctacaaatgggc tttgtggagaccacaatagaaaatattaaacagctgcattcaaagatgaatctggaagcc ttgcagcttggcaaaacagtaggcaagaagagggaggattctttagtgccagatctcatc attactttggatgttctaaggaacttgctttacatgaatgaggatgcaaagatggcatgt tatcattctggcttgccagctatcattcacaagatatggccatggtgtcaaatggagcca cagttgatgctctctgctgtttctttgttgtccacatatgctgccaagtgtcttacagca accagttcattggcttacacctctccatcttcaacatccaccacacaaaatgtgagatcc tcatcccagcaacttggagctaactccttggtccactgcttgttgaagttggctggtaga gatggcattagggagcctctattgaagtccctgtatggtctgctagccaccctgtctctc tcctctgagtgtagaaatatcatgtttaaaagtaacttcttcagagagtttacggagtta aatccaaggaaaccaaagaaaagcaagaaggccaagagcttggaagtctactggctggag ctgatactgaatttgtctttctccacagaaggccagcaaatgatcctcaaaacaggagac tctgtagatctgctgctggactttgtggacagtggaaatgagcccactctggagtactct gtactgatcatcagaaacatgtgttgtcattgcagtagtaaacccaaactcctagccaat gacaagttgttgcctctgctgttggggtgtctgaacaaggagtctgtgaaggtccaaaca attgcagcatcagctctactcggtttggtcttcaataaccaaaaggccaaagtcatgatg aaaaatgccaatcttctgccaaagttacaagaaaccctatccaacctcaacaatttgcaa acaacacctgagaaatgtgtgcaggatttgacatcagtgctgatagcagtatcggagtga

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