Crassostrea virginica (eastern oyster): 111135975
Help
Entry
111135975 CDS
T09197
Name
(RefSeq) nuclear factor of activated T-cells 5-like isoform X1
Organism
cvn
Crassostrea virginica (eastern oyster)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
TIG
CLN3
Motif
Other DBs
NCBI-GeneID:
111135975
NCBI-ProteinID:
XP_022342195
EnsemblRapid:
LOC111135975
UniProt:
A0A8B8EQH8
LinkDB
All DBs
Position
5:40183249..40210562
Genome browser
AA seq
1273 aa
AA seq
DB search
MDQTTNLLSGLLGTSSGSLVTETSALNGLSTPSMQGVSTPSSLGLTAIQVSGTNGIILIS
QPINTSPTAANSLTFALPVSNTEQDVKLSPEKLESMNKLKALLTASPLKVAAPASSAGNA
GNLMKISCTATPINSFIQSTASFQPTLTHITSPQTVSSLGSSDVFLCSSSSYGEVRTTSD
ILMTNQSDNNRSVTVQMDSVDSTTNDQGVYHQATHNSQSLIGYNCVASKEDSSQDKTSVL
HNLLTSGVESSAVDSPTSNCSPLSPEIGVHSSVSSPVLFESNTQSTLIAKSEQLRIEHDE
DVKVEDFAWDVINHEPNKSLKTHRNSNAGTTILENEPDSLFDAGSATTCTTEFTFTKFGA
DVSPVFTFSGEKDDTNSTSSVSIISSLRPDFDHEELTVPEITHIQLSPKISTNHVTRSRQ
RLRELSLNQQFPCRVPGYELQILDQPEDQHRARYLTEGSRGAVKNKAGDGHAVVKLNGKV
DSAVLWVFVGNDSGRVKPHGFYQACKVCGKNSTPCRERDIEGTTVIEMNMKSATDNSVSV
DNVGILKLRNADVEQRIGLAKAKKKSTRARLIFRVMFQKADGNTQTLQISSNSILCTQPI
GQPEICKISCRESPVEGGGELFIIGKNFMKGTKVFFQEREDDDEEGEITWQKEADVDKDY
FQQTHLVCTVPPYHNLEIVKSKRIQLVVHCAGKASDPVQFTYTQVAQAPPTPKKQQETPM
ETDNFQKRRMSFTVSPEALELNNQIQQTQQQTENGSGMFQLPPGTLNMDMKMQVDSPQSM
DTKENMIQSQVMHHTAGLDSTLSMGDLGQQVMSPSESLMNPPVSVENAIFQQGVITKQET
IDSILQQGSPSVHQQTSNPMMQVSSPMMQPLDISDHVNASAGNHQQQQQQQSYGLNINTP
FSQENNVHHIDMDKILSAGLHGNASLGVGTVTTNATDMITSHLSRTMVTSAQPIAQLSRQ
NSSNSITSNSSNSYSHNNILDVSNDFANILQDAKKDHPENIDKMAEAILNEKWNHHEIVQ
EQSHTPTPDAAPQFSQNTYHASSSIAQLLATHLASLQSNRANPAANVQVNPTFQTPNNFT
QSGQLNFTPSQGISLAGLANAGVETSVTQTLLRNMNIPLHNITSLNTVPTHEVKVQLSTH
QAQLLNSSPNPTQNINGHLQQQQQQQQHQQHHQQQQQQQQQQQQQQQQQQQQQQQSVPQI
IICNPQSVSQPTSQAQHSTPNNFVPNPGPAAPPSIVILGGQGGNPSSQGNNHMEVENILR
SILDSLRPQGGSA
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggaccagacaacaaatctgctcagtggattactggggaccagcagtgggtctctggtc
acagaaacatctgcactgaatggactatctacccccagtatgcagggggtgtcaacccca
tcttccttagggttgactgcgatacaggtatcaggaaccaatggaataattctaattagc
caacctattaacaccagcccaactgcagccaactcactcacatttgctttacctgtatct
aatactgaacaagatgtaaagctttcacctgagaagttggagagtatgaacaagttgaag
gcgcttctgactgcttcccctctgaaggtggcagcacccgcttcctcagcagggaatgct
gggaacctgatgaagatctcttgtacagcaactccaataaactctttcattcaaagcact
gcttcttttcagcccaccctcacccacatcaccagtccgcaaacagtctctagtctaggc
agctccgacgtgtttctctgtagttctagttcatacggtgaagtcagaaccaccagtgat
atactcatgactaatcaatccgacaataacagatctgtgacggtacaaatggacagcgtc
gattcaacaactaatgatcaaggggtgtaccaccaggccacacacaactctcagtcttta
atcggttacaactgtgtcgcgtccaaagaagactcttctcaggacaagacctccgtgttg
cataatctcttgacgagtggagtggagtcctccgcagtggatagtccaacatcaaactgt
agtcctctcagtccggagatcggggttcatagttccgtgtcttctccagtcttgtttgag
tccaatacacagtccacgttgattgccaaatcggagcagctgaggatcgaacacgacgaa
gatgtcaaagtggaggactttgcgtgggacgtaattaaccacgagccaaacaaatctctg
aagacccatagaaattccaatgctggaacaaccattttggaaaatgaaccggatagtctg
tttgatgctggaagtgcgaccacttgcacaacggagttcaccttcaccaagtttggtgct
gatgtgtcgccggtgtttacgtttagcggggagaaagatgacacaaatagtacatcctct
gtgagtattatttcttcactaagaccagactttgatcatgaggaactcaccgtcccagag
atcactcatatacaactgtctccaaaaataagcacaaatcatgtgacacgctcccgacaa
cggttacgggaactgtccctcaaccagcagttcccatgccgcgtaccgggatacgagtta
cagattctggaccaacctgaagatcaacaccgggccaggtatctgacagaaggaagcagg
ggggctgtcaaaaacaaggcaggggacggacatgctgtcgtcaagctgaatggtaaagtg
gattctgctgttctgtgggtgtttgtggggaatgactctggaagagtgaagccacatggt
ttctaccaggcctgtaaagtctgcgggaaaaactccacgccctgcagagagagggacatc
gaaggaacgactgtgatagagatgaacatgaagtcagctaccgacaatagtgtatcggtg
gataatgtaggaatattaaagctgagaaatgcagatgttgaacaaagaattggactggcc
aaagccaagaagaagagcactagggctcgcttgatattcagggtaatgttccagaaggca
gatggcaacacacagactctgcagatttcctccaactccatactgtgtacccagcccatt
ggtcagccagagatatgtaagatcagttgtcgggaatccccagtggaggggggaggggaa
cttttcatcatcggtaaaaacttcatgaaagggaccaaggtgttcttccaggagagggaa
gatgatgacgaggaaggggaaataacttggcagaaggaagcagatgtggacaaggactac
tttcaacagactcatctagtgtgtactgtacctccgtaccataacctggaaattgtcaaa
tccaagaggattcagttggttgtccattgtgctggtaaggcaagcgacccagtgcagttc
acgtacacacaagtggcccaagctccaccaactcctaagaaacagcaggaaacgcccatg
gagactgacaattttcagaagagaagaatgtctttcacagtgtctccagaagcattggag
ttgaataatcaaatacagcagactcaacagcagacagaaaatggatcaggaatgttccag
ctgcctccagggactctcaatatggacatgaaaatgcaggtggattctccccagagcatg
gacaccaaggaaaacatgatccagtcacaggtgatgcatcacactgcggggttggattca
actctgtccatgggagatttggggcaacaggtgatgagcccctcggagagcctgatgaat
cccccagtctcggtggagaatgcaatattccaacaaggtgtgatcactaagcaggaaact
attgacagcattctgcaacaagggagcccatctgttcatcaacagacatccaatcccatg
atgcaagtatcctctcccatgatgcaaccgctggacatttcagatcatgtgaatgccagt
gctgggaatcatcaacaacaacaacagcagcagagttatgggttgaacatcaatactccg
ttcagccaagaaaacaacgtccaccacattgacatggacaagatactgtcggctggtcta
catggaaatgccagcctaggtgtgggaactgtgaccaccaatgctactgatatgatcacg
agtcacctgagcagaaccatggtgaccagcgctcaacctatagcacaactaagtcgtcag
aacagcagtaattctataacatccaacagctcgaattcatactcccataacaacattctg
gatgtttccaatgactttgctaatattttgcaagatgcgaaaaaagatcatccagaaaat
attgataaaatggcagaagctattctgaatgagaagtggaatcaccatgaaatagtacag
gagcagtcccatactcccacccctgacgcggcccctcagttctcccagaacacgtatcac
gcctcctccagtattgcccagcttctggccacccacctggcctccctccaatcaaaccga
gccaatcccgcagccaacgtccaggtcaatcccacgtttcagactcccaataacttcacc
cagagtggacagttgaattttaccccgagccagggaatcagtttagcgggacttgccaat
gccggcgttgagacatcggtgactcagactctgttgagaaatatgaatattcccctacac
aatattacgtcgctgaatacagttccaacgcacgaggtcaaagttcagttgtcgacgcat
caggctcagcttctgaatagcagtcctaatcccacccagaacataaatggacatctgcag
caacaacaacagcagcagcagcatcaacaacatcatcaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaaagtgtcccccagatt
ataatctgcaatccgcagtctgtgtcccagcctaccagtcaagctcagcattctactccc
aataactttgtgccaaaccctgggccggctgcaccccccagtattgttatcctcgggggg
caagggggcaatccctcctcacagggtaataaccatatggaagttgaaaacatcttgaga
tccattctggacagtctgcggccacaggggggttctgcctaa
DBGET
integrated database retrieval system
