Crassostrea virginica (eastern oyster): 111136092
Help
Entry
111136092 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 12-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111136092
Membrane trafficking [BR:
cvn04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
111136092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
CUB_M02D8_5_2nd
CUB_M02D8_5_4th
Motif
Other DBs
NCBI-GeneID:
111136092
NCBI-ProteinID:
XP_022342402
UniProt:
A0A8B8ER60
LinkDB
All DBs
Position
5:complement(17578188..17588666)
Genome browser
AA seq
795 aa
AA seq
DB search
MGIPSIFRYCILCVSLVSFSQSDDCFHDEYKEETESIISEGFPIRYSPNSCSQWFISALK
GRXSPEVCVEKNTGKILTLLIYLDIEVGDDGSCNRDALTIGPDPVVELCGKNRQYVYISK
VSHVWLKFYSDNMVSGKGFQIQYIRGPPVAKVCKTDYFQCNNGKCILDKWKCNGLDECGD
KSDENMTACQPATTIPTPPSTINCGKGFFPCYSNLSSAFICLPEAKKCDGRMDCFGGFDE
KNCSINCNAHIHSESGFLTSPLYPKDYPPHMDCKWTIHMQNPKDQIQLRVIDFAIQTNAD
SDYVEVYDGKDAENDRILGTFYGNQVPPSKLESSSNWMTVVFHSDSSFSEKGFNFSYQRK
GFCLSNQLACGNGEVDCYNTYDKCNGVWDCHEHGGDELHCGNCNTLYSCGQGXSQCYPKS
HRCNGVGFCSNKMDEKNCSPESCGTHNGTFLCRNKXCVYEAWICDKTDDCGDWSDEMNCS
KTTNLIIIAAVSGSLICGLLLVIALGCTCKLYNLRQQQLHGPRHETPLSRVYAEFMSRRA
PPPYHEAMLTSRPYEEARREYXERLGQTEERSGSSSQRSRRTRSRGNRVQNTQDRSTETT
TDSTQNGNRGNTEENGANTSVTAPTEERTVNSTHSNIERHSSRTALIVSDSDSDTESELG
TPSADSVRVHFSEETGLSARFHRGNSPGKEITEGESSSNIPRSSPTTGPDISSLDNATIA
SCDSVDPSQEEDKNKPREINCALTLLQENPPSNSTCALFIPENGQNPGNMDRGRHDSAGS
LDXTGSDNLWGDFTS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggaataccaagcatttttagatactgcatactgtgtgtttcccttgtcagtttctct
caatcagatgattgttttcatgatgaatacaaagaagaaacagagagcatcatatctgaa
ggatttcccataagatattcaccaaattcttgttcacaatggttcatatctgcactaaag
gggagataatcacctgaggtatgtgtggaaaaaaatacaggaaaaattctgactctgctc
atatacctagatatagaggtaggggatgatggatcttgtaaccgtgatgctcttactatt
ggaccagatccagttgtagagttatgtggaaaaaacagacaatatgtgtacatttcaaaa
gtttctcatgtgtggttgaagttctacagtgataatatggtatctggaaaaggattccaa
attcaatacatcagaggtcctcctgtagcaaaagtttgcaagactgactatttccagtgt
aataatggcaaatgtatcctggacaagtggaaatgtaatgggttggatgaatgtggagat
aaaagtgatgagaacatgacagcttgtcagcctgctactacaattccaacaccaccatct
accataaactgtgggaaaggttttttcccatgctattccaaccttagcagcgcattcatt
tgtttacctgaagccaagaaatgtgatggaagaatggattgttttgggggatttgatgaa
aagaattgcagtatcaactgtaatgctcacattcatagtgagagtggatttctaacttcc
cccctctaccccaaggattaccctcctcacatggactgtaagtggaccatccacatgcaa
aaccccaaggatcaaattcagcttagagtcattgactttgccattcagacaaatgctgac
agtgattatgtagaggtgtatgatgggaaggatgcagaaaatgatcgaattttgggtaca
ttttatggaaatcaagttccaccatccaagttggaatccagctctaattggatgacagtt
gtattccattcagatagtagcttttctgagaaaggctttaacttttcttatcaaaggaaa
ggattttgcctttccaatcaattggcctgtggaaatggtgaagttgactgttacaacact
tatgacaagtgtaatggagtgtgggattgccatgagcatggcggggatgaactacattgt
ggaaattgcaacactttgtatagctgtggtcaagganagtctcagtgctatcccaagagt
caccgctgtaatggcgttggattttgttccaacaaaatggatgagaagaactgttcccct
gagtcctgcggaacgcacaatggaactttcctgtgccgaaacaagnaatgtgtgtatgag
gcctggatctgtgacaagacagatgactgcggggactggagtgatgaaatgaattgtagc
aagacaaccaatttgatcatcattgctgcagtgtctggatccctgatctgcggattgctg
cttgtgattgctctgggctgcacctgtaaattgtacaacctcagacaacagcaacttcat
ggtcctcgccatgagacccccttgtctcgagtctacgcagagttcatgagcagaagagct
ccacctccataccatgaagccatgttgacctcgcggccttatgaagaggctagaagggag
tacnatgagagacttggccaaactgaggagaggtcaggttcatcaagtcaaagatcaaga
cgaacgagaagtcgaggtaatcgggttcagaatacacaagatcgaagcactgaaactaca
acagattctacacaaaacgggaatagaggaaatactgaagaaaatggtgctaatacatct
gtaactgctccaactgaagaacgcacagtgaatagtacccattctaatatagaaagacat
tcctccagaacagctctcatagtcagtgacagtgactctgatacagagagtgagttgggc
actcccagtgcagattcagtgcgagttcacttttcagaggagactggattatcggctcga
tttcatcggggtaattctccgggaaaagagatcacagaaggtgaaagttcatcaaatatt
ccaagaagtagtcccactactggacctgatatcagtagtttagataatgccaccatagca
tcctgtgatagtgttgatccttctcaagaggaggataaaaataaaccaagggagataaac
tgtgctctgactcttttgcaagaaaaccctccatccaattccacctgtgctttatttatt
ccagaaaatggtcaaaacccaggcaatatggaccgaggcagacatgattcggctggttca
ttggacntcactggttcagacaacctgtggggggattttaccagttga
DBGET
integrated database retrieval system
