KEGG   Crassostrea virginica (eastern oyster): 111136118
Entry
111136118         CDS       T09197                                 
Name
(RefSeq) protein LSM14 homolog B-B-like isoform X1
  KO
K18749  protein LSM14
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvn03019]
    111136118
Messenger RNA biogenesis [BR:cvn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111136118
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 111136118
NCBI-ProteinID: XP_022342447
UniProt: A0A8B8ERA6
LinkDB
Position
5:48106811..48118226
AA seq 534 aa
MSGGIPYLGSKISLISKAGIRYEGILYTIDPNESTVALAKVRSFGTEDRPTDRPVAPRDE
IFEYIIFRGSDIKDLHVCEPPKAQSLQSSMPPQDPAIVKSSQPTSSGFHQQGGGSFGGST
YQPFGGPQLYSQYGQTPGTAPQAFGAIPNQSGSRGPSPSFNRASPTVDQSIQVGSQQAIR
RPEKHELEDHDSFGLEFEGSRGPTPPSVHSNRKSPTLDQGTQMSPEKSQKGGQQHSSQSQ
QINSQHQMGDRSRKNHHQQQRPQSSNTYSRGGRGGFERGGFDRGGARGGRGGSQDKHAYY
GGPSRGNASQRGPTRGNQRGQSSRGRYQSNRKVESPLKFDGEFDFEEANAQFDKDEIERE
LKEKLTIGEKKEEKSINGEKEDSVENGEDEGPEDEEEMFYDKNKSFFDNISCEATERAKG
KSTRPSWREERKLNVETFGMSDNPRRNFRGRGRGYYGGFRGNRGGGGGFRNDGYRSDNYR
GNFRGFRGGFRPSSGRGGSNGGGRSQGWVDYDYDFEAAGIERRGNNNRKAAVQS
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgagcggggggattccatacctaggcagtaaaataagcctaatatcgaaggcaggaatt
cgttatgaaggcatattatacactatcgatcctaatgaatcgactgttgcactagcaaaa
gttcgatcatttggaacagaagataggccaacagatcgtccagtggctcctcgtgatgaa
atctttgagtatataatatttcgtgggagtgatattaaggatttacatgtgtgcgagcct
cccaaagcgcagtcattgcagtcatccatgccaccccaagatcctgctattgtcaagtcc
tctcagccaacctcatcaggttttcatcagcagggtggtggcagttttggtggatccacc
tatcaaccatttggtggtcctcagttatatagtcagtatggacaaactccaggaacagcc
cctcaggcatttggagctatccctaaccagtcaggttccagaggcccctctcccagtttt
aaccgtgcttctcctacagtggatcagagtatacaagtgggttctcaacaagctattcga
cgccctgaaaagcatgagttggaagaccatgacagttttggtcttgaatttgaagggtca
agaggtccaaccccgcccagtgttcactcaaaccgtaaatccccaactctggatcaagga
acgcagatgagtccagagaagtcacagaaagggggacagcaacacagttcacaaagtcaa
cagatcaacagtcaacatcaaatgggagataggtcccggaaaaatcaccaccaacaacaa
agacctcagtcctccaatacttactctagaggaggaagaggtggattcgaaagaggtgga
tttgacaggggtggtgccagaggtggaagaggtggatctcaagataaacatgcatattat
ggaggaccatcaagggggaatgcctcacagagaggaccgaccaggggaaatcagaggggt
cagtcatcaaggggcaggtaccagtcgaacaggaaagtggaatctcctctgaaatttgat
ggagagtttgactttgaggaggccaatgctcagtttgataaagatgaaattgaacgggaa
ctaaaagaaaagttaacaataggtgaaaagaaggaggagaagtctataaatggagaaaaa
gaggacagtgtagaaaatggcgaggatgaaggtccagaggacgaggaagaaatgttttat
gataagaacaaatcattttttgacaacatcagttgtgaagcaacagagcgtgccaaagga
aagtcaactcgaccaagttggagggaagagagaaaattaaatgtggagacatttggaatg
tcagataacccccgtcgtaacttcagaggaagaggaaggggttactatggaggatttcgg
ggtaaccggggtggaggtggaggctttcgaaatgatggataccgttctgataactatcga
ggcaatttccgaggatttagaggaggtttccgaccatcttcagggagaggtggatcaaat
ggtggaggaagaagtcagggatgggtggactatgattatgattttgaagcagcaggtatt
gaacgtagaggaaacaataacagaaaagcagcagttcagtcatag

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