Crassostrea virginica (eastern oyster): 111136142
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Entry
111136142 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: fragile X mental retardation syndrome-related protein 1-like
KO
K15516
fragile X mental retardation protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111136142
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111136142
Factors involved in mRNA localization
Other mRNA localization factors
111136142
mRNA cycle factors
Stress granule specific factors
111136142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_9
Tudor_FRX1
KH_1
Agenet
FXMRP1_C_core
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
111136142
NCBI-ProteinID:
XP_022342487
UniProt:
A0A8B8ERE3
LinkDB
All DBs
Position
5:complement(79429217..79445590)
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AA seq
707 aa
AA seq
DB search
MEDLLVEVCGPNGTYYKAFVRNVHEDEILVSFENDWQPEQRVKFTNARLPLPDQSKHRDY
KDGENVEVFTSSNEKEHMGWWPAVLKMLKGEFAVIEYSGYDSKYTDIVPLERVRPINSNP
SIDKNTFHKFSIEVPIDLREVCQDEHEHAEFKKHIGGGWVSFDHQEGTLNVLSLSDSVIK
KASMLAEMHLRNVRQKLMLKKRTEEAVQRLQSTKIRSGYTEEFRVRDDLMGLAIGTHGAN
IQLARHVDGITNIELDEDTCTFKVHGESQEAVKKARAILEYVEETFQVPRELVAKVIGKN
GRNIQDIVDKSGVIRVKIEGDNENETPRQEVMASLGQVPFIFVGTQESTGNAKILLEYNL
DHLKEVEKLRLEKLEIDQQLKSLAGPQSGPYFPAPRERRGSNEPSSDDRGRRGSGRGRGR
GGRRWANERRTYNTDESSPAPIADWSEEMNAEDSRQSGYYTDSILTGRGSRGGXGGYRPR
GRGGRYPRGSGYSSNRSSDFYDQRRYRSDRPSYSTSRYMAYDTDESRDLRSRRRMTDDDD
TVLDNASVTSQDQDDQRDQRPRRRRRNKNRPYGNGSAASGTETDNSVSNYRPSGGRPSQF
QNDTSSNLVNVVKTEPTKVKSEPDSKLSGPSKEENSDKTNSVKSSSPSSKPQRKPPPPRE
QRKPPGQQQKYPPSARNGTSGSESDSKVGRKVNTTSSKPKEQIVNGE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaggacctactggtcgaagtatgcggtccaaacgggacttattacaaggcatttgtg
aggaatgtacatgaggatgaaatcctggtctcctttgagaacgactggcagcctgagcag
cgcgtcaaattcacaaacgctcgtctgcccctaccagaccagagcaaacatcgggactac
aaggacggggaaaatgtggaggtgttcacaagttccaatgagaaggaacatatgggctgg
tggccagcggtgctgaaaatgctcaagggggagtttgctgttatagaatacagtggctat
gactcaaagtacacagatatagtccccctcgagcgagtccgaccaatcaactcaaacccc
tctatagacaaaaacacatttcacaagttttctatagaagttcctatagacctccgagaa
gtgtgccaggatgagcacgagcatgccgagttcaagaaacacataggaggggggtgggtg
agctttgatcaccaggagggcacactgaatgtcctgtctctgagcgattctgtgattaaa
aaggcatccatgctagctgaaatgcacctgagaaatgttcgtcagaagcttatgctgaaa
aagcgaacagaagaagctgttcagagattacagagtaccaagatcagatctggctacaca
gaagagtttcgtgtacgagatgacttgatgggtctggccattggaactcacggagccaat
atacaacttgctcggcacgtggatggcatcaccaacatcgagctggatgaggacacgtgt
actttcaaagttcatggagagtctcaagaagcagtgaagaaagctagagccatattagaa
tatgtagaggagacatttcaggtgccaagggaacttgttgctaaggtcattggtaagaat
ggccgcaacattcaggacattgtggacaaatcgggggtgataagggtcaaaattgaggga
gataacgagaatgagacccctcgtcaggaggtaatggcgtcactgggacaagtgcctttt
atatttgttgggacacaggagagtacagggaatgccaagatcctgttggagtacaacctg
gaccatttaaaggaagttgaaaagcttaggctggagaaattagaaatagaccaacagctg
aaaagtttagcaggaccgcagtcgggaccatatttcccagcccctcgggaaagaagggga
agtaacgagccatcttctgatgaccgtggaagacgaggctccggaagggggcgtggcaga
ggaggaaggaggtgggccaatgagaggcgtacttacaacacagatgagtcctctccagct
cctattgctgattggtcagaagaaatgaatgcagaggacagtagacagtccggctattac
acagacagtattctgacagggcggggatccagagggggangtggaggttatcggccccgg
ggtagaggaggcaggtatcccaggggatctggctattcatccaataggtcttcagatttt
tatgatcagcgccggtatcgatcagatagacccagttattccactagcagatatatggcc
tacgatactgacgagtctcgggatttgcggtctcggcgcaggatgacggatgatgacgac
acagtgttagacaacgctagcgttacaagtcaggatcaagatgaccaaagagatcaaagg
ccgagaagacggcgaaggaataaaaatcgaccctacggtaatggaagtgccgcttctggt
acggagacagacaatagtgtatcaaattatcgtccctctgggggcaggccgtctcagttt
cagaatgacacttcctccaatcttgtgaatgtagtgaaaactgaacccacaaaagtcaaa
agtgaacccgactccaaactatctgggccgtccaaggaggagaactctgacaaaactaac
agtgtgaaatctagtagtccgtcaagtaaaccccagcgaaaaccacccccgccccgagaa
cagaggaaacccccggggcagcagcagaaatatcccccctcggccaggaacgggacgagc
ggatcggagtccgattccaaggtcgggagaaaggtcaacaccacaagtagtaaaccaaag
gagcagatcgtcaatggggagtga
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