Crassostrea virginica (eastern oyster): 111136239
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Entry
111136239 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: protein HIRA-like
KO
K11293
protein HIRA/HIR1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111136239
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111136239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
HIRA_B
Motif
Other DBs
NCBI-GeneID:
111136239
NCBI-ProteinID:
XP_022342655
UniProt:
A0A8B8ERS8
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All DBs
Position
5:14976233..14993552
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AA seq
1053 aa
AA seq
DB search
MNIALATLPRNPSIMRLLKPAWVTHDGKPIFSIDIHPDGSRFATGGQGDDSGKVVIWNFE
PVRDEKAEKDENVPRVLCQMNNHLACVNCVRWSNNGKSLASGGDDKLIMIWQTSRAGVGP
SFGSGTTTYEQWRPAATLRGHTGDVLDLAWSPNDSWMASCSIDNSIIVWNADNFPAQVTV
IKGHDGLVKGVTWDPVGKYLASQSDDRSLRVWRTRDWKEEAKVTEPFTECGGTTHVLRCH
WSPDGAYIVSAHAMNNSGPTAQIIEREGFKTSLDFVGHRKAITVVRFNPNIFSKKMKKGV
DQGQQYTCCAIGSKDRSLSVWLTALKRPLVVTHDLFENTILDISWSKSGLELMACSSDGT
VAYIEFNKDEIGDPMAQNDVELFLEKIYGKCMTKNKSSTNGTQIIESAALLKLQQQKREE
LQKRMSESADDKCNLSRMSDSQGSPFKPTDKQIETKTADGRRRIXPIFLAPQLDVNVGEA
PLPFKSQGINFTTTKESSKIVVEKQNIVTKGMISPSSRSNLSNSNLSNQAFPPLGGEGTP
KLSQGFPVGGDTTPKSTQVTTSTPPGAEKMETTPASDTGEPSTPSKVINVSIQPMTALQS
KPKIKHHSSEKKSSEKSEVKEKSFDKDKASDVKDKSKTPSDRGDKEKTKDHKLSTGMKRK
HDGEKKEEKRGRPRKIDKERALMSTPLTHVHHPPPSLDGFYKAAVPELELPVPSIQKTFT
KTVGGKDSSLSMEVENNISIGVHTLHKMRCVQEGLVLWEQVLNSPILSVAGSKNVVCAAC
EDGSLNMFYISGSRCFPSIVLDSKVSKLHIKTFFIMVITQKAFLYIWNVHHQSVVIRKES
LCTIISGSDDLQKSLLTEEGMPIITVSNKKSYTYSKDMGTWMLLHNKGDALQQCSDHHSC
TPTKDTSKCQGPLASLQTSHDRLGMQASRMFSAGQSLQQSSTLSHIESQLAACLLLKSAP
EYKFWLQTYTRYLSQEGLESESRHIFESKLRDVCDDLLGPVYKTKGKSSWDPLILGMDKR
SLLQEILPSIGSNLKLQRMFTEYHDQLESIEEK
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagcattagccactctaccaagaaatcctagtattatgagactgcttaaacct
gcttgggtaacgcatgatggtaaacccatattttccattgatatccatccagatggttca
cgatttgcaacaggtggccaaggtgatgattctggaaaagttgtaatctggaattttgag
cctgtccgagatgaaaaggcggagaaagacgaaaatgttcctcgagttctctgtcagatg
aataatcatcttgcatgtgtaaactgtgtgaggtggtcaaacaatggaaaatccttagca
tcagggggagacgataaattaatcatgatatggcagacatcaagggctggtgttggaccc
tcatttggatcaggtaccacaacttatgaacagtggaggcctgcagcaacattgaggggc
catactggggatgttcttgaccttgcttggtccccgaatgacagctggatggcttcctgc
agcattgataattctatcattgtttggaatgcagataactttccagcacaagttacagtg
attaagggccatgatggtttggtaaaaggggtcacctgggatcctgtgggaaaataccta
gcctctcagtctgatgaccggagtctgagagtgtggagaacaagggattggaaagaggag
gctaaggtcaccgagcccttcacagagtgtggaggaaccacccacgttctgcgctgtcat
tggtcacctgatggagcctacatagtgtcagcccatgcaatgaataactcgggacccaca
gcacaaatcatagagagggaaggctttaaaacatctctagattttgttggtcaccggaag
gctataaccgttgttcgatttaacccaaatatattttcaaagaagatgaaaaaaggtgtt
gatcagggtcaacaatacacctgctgtgccattggcagtaaggatcgctccctctctgta
tggctaacagctctgaagagacctttggttgtgactcatgacttatttgagaataccata
ttggatataagctggagtaagtcggggctggagctcatggcctgctccagtgatggtact
gtagcctatatagaattcaacaaggatgaaataggggacccaatggcccagaatgatgtg
gagttgtttctggagaagatttatgggaagtgtatgaccaagaataagtcctccacgaat
gggacacaaattatcgagtcagcagccttactgaagctacagcaacagaagcgtgaggaa
ttgcagaaaaggatgtctgaatcggctgatgacaagtgtaacctcagtcgcatgtctgac
agccagggtagtccattcaagccaacagacaaacaaattgaaacaaaaacagctgatggg
aggaggcgaatcnacccaatattcctggccccacaactagatgttaatgttggtgaagct
ccattaccatttaagagtcaaggtatcaattttaccaccaccaaggagtctagtaaaatt
gttgtagaaaaacaaaacattgtgactaaagggatgatctccccttcctctcgctccaat
ctgtccaactcaaacctgtcaaaccaggcattccctcccctcggtggtgaggggacccca
aaattatctcagggatttccagtgggaggtgacaccacccccaaatcaacccaggtcacg
acctccactcctcctggagcagagaaaatggaaaccacccctgcctctgacactggtgaa
ccatccacacccagtaaggtcataaatgtgtctatacagcccatgacagcactgcaatca
aaaccaaaaattaagcaccattcctctgaaaagaagtcttcagaaaaatctgaggtcaag
gagaaatcttttgacaaggacaaggcatctgatgtcaaggacaaatcaaaaaccccatcc
gacagaggtgataaagaaaagacaaaggatcacaaattgtcaacaggaatgaaacgtaaa
catgatggtgaaaagaaagaggagaaaagagggcggccccgcaagatagataaagaaaga
gccctcatgtcaaccccacttactcatgtacatcaccctcccccatcactggatgggttt
tacaaggcagctgttcctgagcttgagttaccagtgccctcgatacagaaaacattcacc
aaaactgttggagggaaagatagctctctatcgatggaggtagaaaacaacatcagtatt
ggggtccacacactacacaagatgaggtgtgttcaggaaggtctagtcctgtgggaacaa
gtcctgaactcccctattctgtcagtagcaggatccaagaatgtagtgtgtgcagcctgt
gaggacggatcactgaacatgttctacatcagcggctctcgctgcttccccagtattgtg
ttagactccaaagtctccaaactgcatatcaagacattctttatcatggtcatcacacaa
aaggcatttctctatatttggaatgttcatcaccaatcagtggttatcagaaaagagtcc
ttatgtacaatcatatcagggagtgatgatctccagaaatctttactgacagaggaaggc
atgcctatcataacggttagcaacaaaaagtcgtacacatattcaaaggatatgggcaca
tggatgctgctacataataaaggtgatgccctgcagcagtgctcagatcaccacagctgt
accccaaccaaagacacctccaaatgtcagggacccctggcctcattgcagacttcacat
gacagactgggtatgcaggccagcagaatgttcagtgctggtcagtctttgcagcaaagc
tctaccctcagtcatattgaatctcagctggcagcatgcctcttgctcaagtcggcccca
gaatacaagttctggctgcagacatacactagatacctgtctcaggaaggattagaatca
gagtcgcgacatattttcgagtccaagctacgagacgtgtgtgacgaccttttagggcca
gtttacaagacaaaagggaaatcctcatgggatccattgatattgggcatggataaaaga
agtttacttcaggaaattctaccgagcattgggtctaatttgaagcttcaaagaatgttt
acagagtaccatgaccaactagaatccattgaggagaaatga
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integrated database retrieval system
