KEGG   Crassostrea virginica (eastern oyster): 111136243
Entry
111136243         CDS       T09197                                 
Name
(RefSeq) splicing factor 3B subunit 4-like
  KO
K12831  splicing factor 3B subunit 4
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111136243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvn03041]
    111136243
Spliceosome [BR:cvn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    111136243
 Complex B
    111136243
 Complex C
   U2 SnRNP specific factors
    111136243
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5
Other DBs
NCBI-GeneID: 111136243
NCBI-ProteinID: XP_022342659
UniProt: A0A8B8ERS7
LinkDB
Position
5:1466533..1470942
AA seq 373 aa
MAAGPIAERNQDATVYVGSLDDKVSEAILWELFLQAGPVVNVHMPKDRVTQSHQGYGFVE
FMGEDDADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFEAADAALEAMNGQFLCNRAISISFAFKK
DSKGERHGSAAERFMAKQNPLSLTDRPHQLFADAPPPPQQPPSQMASSSLAPPPPPPSMG
GMSSMPGMPPGNMPPPMMPMQQPMPPPPMPPPMGNPGYPPQHGQMPYPPPPRSGPPGMPP
VSSSHSQAPPPPPSSQAGSQMPPPPGVPGMGMPPPPPGMRPPPGWRPPHGMRGPPPPMYG
RPPPPGMRPHPLV
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggcagctgggccgatagcagaacgtaatcaagatgctactgtgtatgtaggcagtttg
gatgacaaagtctcagaggccatattatgggaattgtttctacaggcaggtcctgttgtg
aatgttcacatgcccaaggaccgagtgacacagtcccatcagggctatggatttgtggaa
ttcatgggggaagatgatgctgattatgccatcaagattatgaacatgatcaaactttac
ggcaaacccatccgagtcaacaaggcctcagcccatcagaagaacctggatgtcggtgcc
aatatctttattggaaacttagacccagaagtagatgaaaagttactatacgacacattc
agtgcattcggagttattcttcagacacctaagataatgcgagatccagacacggggaat
tccaaaggctatgccttcatcaactttgccagttttgaggcagcagatgcagcacttgaa
gccatgaatggacaatttctgtgtaaccgagccatctcaatctcgtttgccttcaagaag
gattccaaaggagaaagacacggctcagcagcagagagattcatggcaaaacagaacccc
ctatccttgacagaccgccctcatcagctgtttgcagatgcccctccccctccacaacag
ccaccctcccagatggcctcctcctcactggccccgccccctccacccccgtcaatggga
ggaatgtccagtatgccaggaatgcccccagggaacatgcctccccccatgatgccaatg
cagcagccgatgccgccccctcccatgcccccacccatggggaaccctggctacccccct
cagcacggtcaaatgccctaccccccaccacctcgctctggacccccagggatgcccccc
gtgtccagcagtcattcccaggctccaccaccccctccctcatcacaagcaggttcacag
atgcctccaccccccggtgttccagggatgggtatgccccctccccctcctggtatgagg
ccacccccgggctggagaccaccccacggaatgagaggtcctcctccccccatgtacggt
cggccaccacctccagggatgagaccccaccccctggtatga

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