Crassostrea virginica (eastern oyster): 111136375
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Entry
111136375 CDS
T09197
Name
(RefSeq) LIM/homeobox protein Lhx1-like
KO
K09372
LIM homeobox protein 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111136375
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
111136375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Furin-like_2
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
111136375
NCBI-ProteinID:
XP_022342886
UniProt:
A0A8B8ESG3
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Position
5:complement(6097390..6117379)
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AA seq
471 aa
AA seq
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MVQCAACDRPILDRFLLNVLDRAWHAKCVQCSDCKITLTDKCFSRDGKLFCRNDFFRRFG
TKCAGCSQGISPNDLVRRARNKVFHLKCFTCIICRKQLSTGEELYVMDENRFICKEDYIS
SKLQGSSDIEDEGDLDVALEHQTSLSDKDFSIDGDNNTDIDSKENILTSVPNNNNVNNNN
NNNLNKSSSLNSLPPSPDPLKDDTALLKISSDSNHSTQSCDTNGNSIPTNNTLTPDGDRS
GEEMNDNANGGSTAGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMR
VIQVWFQNRRSKERRMKQLSALGARRHFFRNPRRMRALRAGMSPNDLDDGDMMAGPGFGY
FSENGQDFYPGYQGYNDFFPGQGDGGPPPMNFLPPTSQGTPPLTMEQSLHHNSNMGPDPQ
FLPGDLIHPSSSPEPIQMHPHDGPYRHPGPPNSMAGNFSSLSHSEMAGEAW
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagtgcgctgcatgcgacagaccaattctggaccgtttcctgctgaacgttttg
gacagggcatggcatgcaaaatgcgtacaatgctcagactgtaaaatcacgcttacagac
aaatgtttttccagggacgggaaattattctgtagaaacgacttctttaggcgatttgga
accaagtgtgcgggttgtagccagggaatctcccccaatgacttggtcaggagggcccgg
aacaaagtgttccatctgaaatgttttacttgtatcatttgtcggaaacaactctccacc
ggcgaggagctctatgtgatggacgaaaatagatttatttgtaaagaagattatatttcc
agtaaattgcaaggttcctctgatatcgaggatgagggggatttggatgtagcacttgaa
caccagacgtcgctctcggacaaagatttcagcattgacggtgataataataccgacata
gactccaaggaaaacattctcactagtgttccaaacaacaataatgtaaacaataacaat
aacaacaacttaaataaatctagctctttgaattccctccccccgagtcctgatccactg
aaggatgacactgcgctgttaaagatttcctcagattccaaccatagtactcagagttgt
gatacaaacggaaattctattccgacaaataacaccctgaccccggacggggaccgttcc
ggagaggaaatgaatgacaatgccaatgggggctctaccgcaggggccaagaggcgaggt
cccagaacaaccatcaaagccaaacaactggagaccctcaaggcagcgttcgcagcaacg
cccaagccaactcggcatatacgagagcagctagcccaggaaacgggacttaacatgcga
gtgatccaggtatggttccagaatagaagatcaaaggaacgccgcatgaagcaacttagt
gctcttggtgctagacgtcattttttccgaaatccaagacgcatgcgcgcactgagagct
ggaatgtcacctaacgatcttgacgacggggacatgatggcgggtccaggattcggatat
ttttctgaaaacggacaagatttctacccaggttaccaaggttacaatgatttttttccg
ggtcagggggacgggggtcccccaccaatgaattttctaccccctacttctcaaggcaca
cctccacttaccatggaacagtcactacatcataacagtaacatgggacctgacccccag
tttctgccaggtgacctcatccacccctcgtcttccccggaacccattcagatgcacccg
cacgacggcccttacaggcatcccggacccccaaattccatggcgggcaatttttcgtcc
ctctcacactcggaaatggcaggagaagcttggtga
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