Crassostrea virginica (eastern oyster): 111136433
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Entry
111136433 CDS
T09197
Name
(RefSeq) transcription termination factor 2-like isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111136433
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111136433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
111136433
NCBI-ProteinID:
XP_022342988
UniProt:
A0A8B8ETC8
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Position
5:complement(68805901..68824093)
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AA seq
1216 aa
AA seq
DB search
MEEIKCEKHNELCFLKTGLKEGPSHGVSFYVCSQSSSCGFVKKSEIQKLECPRHHSVVDL
QSIFSSKKSNEKRQYYRCRKKDSDENWCGYFTLKKVSGKPLADYNYQERKAVIERKKIAT
TREGGNSKTSTDMDSDLKISSEGENSLAKKQTESENDIAGELANLSIDEGKQQTGKEQFD
SRQQRGNKLKLKKDSNSDDSAFEKYRNLSSTSESDSIDSFDSPLSRNIAIAHTSDSDLDK
SPPNNESSTQSNLNQAGGENKTPAHRHKYEGIGRIKKKSPASSSQTDSSPELPLLQRIRS
KSGEQEVANPKSPVEIVDLTSDDEEGDPEGVKRSAMRPQSPENKQERYRPPPYTLPKPQD
QQSANQTQSNKSLQPLTAAEEWQLQNDIHSRDSLLQQLKRQMHTIATVKMSSLPDKGEKL
RKQMDDIERAVNKLNKRIADLKPRSKESGTVSVQPKPTVSNVQPQVIKIPSPDGSGPPQT
VKVVPGQTSQGQPQVIKVYSAGADGQQKLIHVVQPGTETGQKSVPTGSHVPHNPQGLKQT
SILPHATTIPPHILQQLYAANPQAMTLYGGRMTAARLREVGSVTKEAIEKLHSQLKTCPD
SSTELEDPKGLKVSLMVHQRQALAWLTWRESQHPPGGILADDMGLGKTLTMISLVLKQQQ
LKAKQEKEDEWLSTEKQLGKVIKSRATLIICPASLIHHWLKEIERRVKGKKLQVLMYHGP
NREKDVLRIADNDIVLTTYTLVGKEVGTVNVDSDAPAKDEENNMEDKQENTGCEKEDATL
LRIVWERIILDEAHNIKNRKSLSAMASCRLRARFRWAMTGTPIQNELLDVYSLLRFLRCS
PFDEYKVWKQQVERSKSGGNNRLNVLIKCLLLRRTKTQIDSAGKPLVSLPSKSSSVHEIE
LSKDERMVYEKLFSQSRSVMKDYLRRHEDKELGRSTGPQPTINPFRDRTGVDPVEGGGSG
LAGGDTGRSSGQMILVMLLRLRQCCCHLSLMKEAFDNETSETEGLELDIVDQMKDLMLGE
EGSPEEKDKLTKDSPIFHTAAMSTKLKAVMDKLYEIKELPQKQKSVVVSQWTKMLDILAH
HLKIAGIKYSIIQGSVSAKKRMEAVEEFNTDQNGPEVMLVSLKAGGVGLNLIGGNHLFLI
DQHWNPSLEDQACDRIYRVGQTKDVFIHRFLCKDTIEERIVALQQKKQDLAKSVLTGTGG
ASSKLTLDDLRMLFGV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggaggagataaaatgtgaaaaacacaatgaattgtgctttttaaagactggactgaag
gagggaccatcacatggtgttagtttttatgtttgcagtcagtcttcctcgtgtggattt
gtgaaaaaatctgaaattcaaaaattggagtgtccaagacatcattcagttgtagatttg
cagtcaatattcagctcaaagaaatcaaatgaaaaaaggcagtattacagatgtcgtaag
aaggactctgatgaaaactggtgtggatattttacattaaagaaggtgtcaggcaaacct
ttggctgattataattaccaggaaagaaaggctgttatagaaaggaagaaaatagcaacc
acaagagaaggtgggaattccaaaacttcaactgacatggactccgacttgaagatttct
tccgagggtgaaaattctctcgcaaagaagcaaacagagagtgaaaatgatattgctggg
gaattggccaatctaagcattgatgaaggaaaacaacagacaggaaaagagcaatttgat
agcagacagcagagaggaaacaaattgaagttgaagaaggatagtaattcagatgattca
gcttttgagaagtatcgcaatctttcctcaacttctgaatcagacagcattgatagcttt
gactcgccactttccagaaacattgcaattgcacatacatctgattcggatcttgacaag
agtccaccgaataatgagagcagtacccaatcaaatttgaatcaggccggtggggaaaac
aaaaccccagctcacagacataagtatgagggcatcgggaggataaaaaagaagagtcca
gcctcgagttcacagactgactcctcccctgagcttccgctgttacagagaatacgttcg
aagtccggtgaacaagaggtagcaaatccaaaaagccctgtggagattgtggacttgact
agtgatgatgaagaaggggatcctgagggggtgaagagatcagccatgagaccccaaagt
cccgagaacaagcaggaaaggtaccgacctcctccttatactcttcctaaaccccaggat
cagcagtcagccaatcagacacagtccaacaaaagcctgcagccactaacagctgccgaa
gaatggcagttacagaacgacatacattcgagagattctttacttcagcagttaaaaaga
caaatgcatacaatagcaacagtgaaaatgtccagtttgccagacaagggtgagaagcta
cgtaaacagatggatgatatagaacgagctgtaaataaactgaacaaacgcattgctgat
ctgaaacctcgatctaaagagtcagggacagtcagtgtacagcctaaacccacagtttca
aatgtccaaccccaagtcatcaagattccctcccccgatggttcaggcccccctcaaaca
gtaaaagtggtccctggacagacatcacaaggccagccccaggtgatcaaggtgtattcc
gcgggggcggatgggcagcagaaactcatccatgttgttcagccagggactgaaacgggg
cagaaaagtgtgcccactggtagtcatgttccccacaacccccagggactgaaacaaacc
agcattctgccacacgccactaccataccccctcatatcctacagcagctctatgctgct
aaccctcaagccatgaccttgtatggaggtcgaatgacagcagccagactgagggaggtg
gggagtgtaactaaggaagccattgaaaaactgcacagccaactgaagacctgcccagat
tctagcactgagctggaggaccctaaaggtctgaaggtgtccctgatggtccatcaaaga
caggccttggcctggttaacctggagagaaagccagcacccacctggagggatcttagct
gatgatatgggactgggaaagactctcacaatgatttctctggtgctgaaacagcagcag
cttaaagcaaagcaggaaaaggaagacgagtggttaagcacagagaaacagttagggaaa
gttattaagtctcgggccaccttaattatctgtcctgcctccctgattcatcactggctc
aaggaaattgagagacgagtcaaaggaaagaagcttcaggtgttaatgtaccatggacca
aacagggaaaaagatgtccttaggattgcagataatgatatagtgctgaccacgtacaca
cttgttggtaaggaagtggggacagtgaatgtggactcagatgctccagccaaggatgag
gagaataacatggaggacaagcaggaaaacacaggttgtgagaaggaggacgccactcta
ctgaggattgtgtgggagaggattattttagacgaggctcacaatatcaagaacaggaag
agtctgtcggccatggcctcctgtcgactgcgggccagattccgctgggccatgactggc
actcccatacaaaatgaacttctggatgtgtactctttactcagatttttgcgttgttct
ccctttgatgaatacaaagtttggaagcaacaagtggaaagaagcaaatctgggggaaat
aacagactgaatgtcctcatcaagtgtttgttgttgcgcagaacaaagacccagatcgac
agtgctggcaaaccgctggtttcccttccatcaaaatcctcctcagttcatgagattgag
ctttctaaagatgaaagaatggtgtatgaaaagttgttttctcagtctagatctgtgatg
aaagactacttgagaaggcatgaggataaagagcttggaaggagtacaggtccacagccc
accattaatccattcagggatcgtacaggagtggatccagtggagggtggagggagcggg
ctggctgggggagacactgggaggtctagtggtcagatgatcctggtcatgttgctgcgt
ctcagacagtgctgctgtcacttaagtctaatgaaagaggcctttgataacgaaacatca
gagacggagggattagagttggacattgttgatcagatgaaggatctcatgctgggagag
gagggttccccagaggagaaggacaaactgaccaaggattcccccatatttcacactgca
gccatgagtaccaagttaaaagctgttatggacaaactctatgaaatcaaagagttacca
caaaaacaaaaaagtgttgtggtctcccaatggactaagatgctggatatcctagctcat
catctgaagatagcgggaataaagtactcaatcatccagggctcggtgtcagccaagaag
aggatggaggcggtggaggagtttaacaccgaccagaatggaccagaggtcatgctggtg
tccctgaaggccgggggagtggggctcaaccttattggtggaaatcacttgtttctgatc
gaccagcactggaatccatcattggaggaccaggcatgtgacaggatctacagagtcggc
caaacaaaagatgtattcatacacaggtttctttgtaaagatacgattgaggagagaatt
gttgcacttcagcagaaaaaacaagatctagccaagagtgtcttaactggaactggagga
gcgagttcaaagttgaccttggatgacctcagaatgctgtttggagtttga
DBGET
integrated database retrieval system
