Crassostrea virginica (eastern oyster): 111136493
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Entry
111136493 CDS
T09197
Name
(RefSeq) tonsoku-like protein isoform X1
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111136493
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111136493
Transcription factors [BR:
cvn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
111136493
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111136493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
TPR_12
Ank_2
Ank_4
Ank_5
Ank_3
TPR_2
LRR_6
TPR_1
TPR_7
TPR_8
STAS
LRR_4
TPR_Slam
LRR_8
Motif
Other DBs
NCBI-GeneID:
111136493
NCBI-ProteinID:
XP_022343084
UniProt:
A0A8B8ET01
LinkDB
All DBs
Position
5:18231575..18248910
Genome browser
AA seq
1443 aa
AA seq
DB search
MYTKDEREIEKLRREKLKADKKGNLKEVATLANYLGELLAKNGKFIEAREEHEQELGICE
ALNDSIGAAVACRKIGENYCDLQEYEKALQFQQRHLNLAKKCGSLIEEQRALATIGRTHF
IKSENTANPEGCTTALHKALDAYQKSLQVCEGLKTSGEVAEKEYFEMKARLYLNIGLVHD
GLGDSLQCTDNLKRAITLADRHHFDSDLYRCQMCLAGRYQRNGNLSQSLRSLEAAQKIAV
KMRDKQLQSDTLTTKAMILCHIGDFSSSMHSLKKAYKLAPITEADNLKKLFHAVSKLEKA
TLTLETTPSIPSDERMRLFESLGDCSAEAGNYKQAIEYYLKMLQCAEDLNKPMKDFIPIF
VSLAQTYTDDKQYKNAIMYYKREISARENDEVQVCKTLLNIAEIQVSDGQSYDEISKTYL
SAHKQAKNAKHHLLEYHVLKAMTDVQKSFGRKSHLQQTQAKLKQVKERYNIDSSDELSDE
ERDSQREQTEDSNTELSISDLSESDDTDEELPVNTGTSTGRARRTTASTKRNEKGETPLH
RACIEGNLKKVEKLIEQGHPVNPRDYCGWIPLHEAANHDFYDIVQYLVEHGAAVNDRGGQ
HCGGVTPLIDAASCGNMEVMELLISKGAKVYAKDDEGNTALDCLRSWRQRCDNMTEDLTA
RFTSLEQKLQKNLPNHCPTRKENTIPSPLSQSSNVMPALIPPKQRKKDRNLRRTLSSGSE
EEIPETGTAQSKEGSEETYPNPLLEESAPKRATDFYKSAIKGVGLSASKMVSASQPSTSK
ALKEIQPYLAEEEMLDDDWLIDDMRPTGKKRRLDVNDVFSKNSVSSSQRAPKRKKRSDEY
EPNRVPVLPGDANDGQHHITDHPCLQDQNIDDDFLPNDICFISENENSNDSVETRPKSRL
SRKPKQVKLTNFGIRKSSMSSFVADENRNKDDLPPLEVASNQNHLLPGNSYPNVGASLSS
SLSSSQMVPGILSQSALFPVKNLKVTVKDKKLLVPVFEKDLNSTVAWLAQETASRYHRLT
GLQCVLSIMLGDGSVPSPDDSVTLLLSSNEEISAKVEQLDLPPMAQQYEQVCQELSCISY
RNIKTILLQSDSNGGKLDFQNLALRPVHLKPVFKALLFQQSITEICLKGNRLGDRGLEDF
LVVLKSLSSLTSLDLSCNGISSVGLKALAGCALSMKDETGTSAPKRLLHLSLSNNWLGDT
CCSLLNTVISSLSSLETLELASCGFTSKLFQQNRLSLVETVKNSGVHTLDVSCNSLGSLG
VELVLCCLNPRLVTTLNFSGTVTASGVLHLFLHHIEMFLTQDNCALSDLTLSSCQISMEE
KDKLVRLITVGKKLHRLDIACNPKLTSEAIGALLSESTKRDSPLEQLVAEGCTVSSPLNS
DFLDSLNDKLQSARPLTFLSLSSQQLEKVDVECLSDIWTQSWQAGVGVIHNHCDVIRLCV
EDK
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccaaagacgaaagagaaatcgaaaaactgagacgagaaaagcttaaagctgat
aaaaaaggaaacttgaaagaggttgccacattagcaaattatctgggagagttattggca
aaaaatggaaaatttatagaagcaagagaggaacacgaacaagagctaggtatttgtgaa
gctttgaacgatagcattggtgctgctgtggcttgtaggaaaataggagaaaactactgt
gatttacaagaatatgagaaagctttacagtttcaacagcgtcatcttaaccttgctaag
aagtgtggcagcttgattgaagaacaaagagcattggccacaattgggaggactcacttc
attaagagtgaaaacactgctaatcctgagggttgcaccactgccctacacaaggcactg
gacgcctatcagaagagtttacaggtgtgtgagggcttaaagacatcaggggaagtcgcg
gaaaaggaatattttgaaatgaaagccagactgtatctaaatataggccttgtgcatgat
ggtcttggggatagtttgcagtgtacagacaatctgaagagggctataactctagcagat
cgacaccactttgacagtgacttgtaccggtgtcagatgtgtctggccggcaggtaccag
cgcaatgggaatctcagtcagtccttacgatctcttgaagctgctcagaaaattgccgtc
aaaatgagagataagcaattacagagtgacacgctgactacaaaagcaatgatattatgc
cacattggtgatttcagcagtagcatgcattctttgaagaaagcatataaacttgccccc
ataacagaggcagataacttaaagaaattgttccatgcagtgtcaaagctggagaaagcc
actttaaccttagaaacgaccccttccatcccatcagatgagagaatgaggttgtttgaa
agtctgggggactgttcagcagaagctggcaactacaagcaggcaatcgaatattatctg
aaaatgctgcagtgtgctgaagatttaaacaaacctatgaaggacttcatcccaatattt
gtctctctggcacaaacatacacagatgacaagcaatacaaaaatgccatcatgtattac
aaaagagaaataagtgccagggaaaatgatgaagtacaggtctgtaagactttactcaat
attgctgagattcaggttagtgatggacaaagctatgatgagatcagcaagacctacctg
tcagctcataagcaggccaaaaacgccaagcatcatttgttagagtatcatgttctgaaa
gcaatgacagatgtacagaagagttttggtaggaaatcacatctgcagcaaacccaggcc
aagttaaagcaagtcaaagagaggtacaatattgacagctctgatgaactgagtgatgag
gagagagacagccagagagagcagaccgaggacagcaacacggagctcagtatatcggat
ttatcagaatcagatgacacagatgaggaactccctgttaatactggtaccagtacaggc
agagccaggcgtacaacagcttcaaccaagagaaatgaaaaaggggaaactcctcttcac
agagcttgtatagagggaaatctcaagaaagttgagaaacttatagaacaggggcaccct
gtgaaccctcgagactattgtggatggattcctttacatgaagcagccaaccatgacttc
tatgacattgtccagtatctagtggagcatggagcagcagtgaacgaccggggaggacag
cactgtgggggggtcacgcccctcattgatgccgccagttgtggcaatatggaagtcatg
gaacttctgatctcaaagggagcaaaggtgtacgctaaagatgatgaggggaacactgca
ttagactgcttgagatcttggagacaacgctgtgacaacatgacagaggatctcactgcc
agatttacttcactggagcagaagctgcaaaagaacctgccaaaccattgcccaacccga
aaggagaacacaattccttctcccttgtcccagtcttccaatgtgatgccagcgttgatc
ccacccaaacaaaggaaaaaggaccgtaatctgagaagaacactatcatctggatcagaa
gaggaaattccagagacagggactgctcaatcaaaggagggctctgaggaaacgtatccc
aaccctcttctggaagaaagcgcccccaagcgagccacagatttctacaaaagtgcaatc
aagggagtgggactgagtgcatcgaaaatggtgtctgcttcacagccctctacctccaaa
gcattaaaagaaatccagccatatttagcagaggaggaaatgctggatgatgattggtta
attgatgacatgagaccaactggtaaaaagagaaggttggatgttaatgatgtgttttcg
aaaaattcagtgtcctctagccagagagcaccaaagaggaagaaaaggtcagatgaatat
gaacccaacagggtgcctgtactgcccggtgatgctaatgatggccaacaccatataaca
gatcatccttgtttgcaagatcaaaatattgatgatgactttttacccaacgacatttgt
ttcataagtgaaaatgaaaacagtaatgatagtgtagaaacaaggcctaagtcaagactg
tctaggaaacccaaacaagtgaaattaaccaattttggaatcagaaaatcaagtatgtct
agttttgtagctgatgaaaatagaaataaagatgaccttcctccattagaagttgcctct
aatcaaaatcatttgttgcctggaaactcttatccaaatgttggagctagtctgtcatca
agtctgtcctcaagtcagatggtacctggaatactgtcacagtcagcactatttcctgtc
aaaaacttgaaagttactgtcaaggataaaaaactcttagttcctgtctttgaaaaagac
ttaaacagcacagtagcgtggttggctcaggagacagcctccaggtatcacaggctaacc
ggattacagtgtgtcctcagcatcatgctgggggatggatctgtccccagtccagacgac
tccgtcacactcctgctctcatctaatgaggagattagtgccaaagtagaacagttggat
ttaccaccaatggcacagcagtatgaacaagtctgtcaagaattatcttgcatcagctat
agaaacataaagactatcttgctccagtcggactcaaatggaggcaagcttgatttccag
aatttggctttacgtccagtccatctgaaaccagtcttcaaggctttactattccagcaa
agcatcacagaaatttgtttgaaagggaaccggttgggggatcgcggtctggaagacttc
ctcgtcgtgttgaagtccctgagtagtctgacaagcctagacctgtcctgtaatggtatt
agcagtgtgggactgaaggccttggcaggctgtgcattgtctatgaaagatgaaacagga
acaagtgcccctaagcgattgctccatctctctctcagtaacaactggctaggggacacc
tgttgctccttgctgaacacagttatctcctctttgtcctccctggagaccctagaacta
gcctcctgtggtttcacctccaaactgttccagcagaatagactcagtctggtagagact
gtgaaaaactccggtgttcacactcttgatgtctcgtgcaatagtttgggttcgctggga
gtagaactggtgctctgttgtttgaatccccgtctggtgaccaccctaaacttctcggga
acagtgacagccagtggtgtgctccatctgtttcttcaccacatcgaaatgttcctcact
caggacaactgtgccttgagtgacttaacattgagttcatgccagattagcatggaggag
aaggataagttagtcaggttgataacggtggggaagaaacttcaccgtctggacattgct
tgtaatccgaagttaaccagcgaggccattggagcattgttatccgagtctacaaaacga
gacagtcccttggagcagctggttgctgagggatgcaccgtctcctcccccctcaactcg
gactttctggactcccttaacgacaaactacagagtgcccgacctttgacctttctgagc
ctgagcagtcagcagttggagaaggtggacgtggagtgcttgtccgacatatggacgcag
tcctggcaggcgggggtaggcgtcatccataaccactgcgacgttataagactctgtgtg
gaggacaagtga
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integrated database retrieval system