Crassostrea virginica (eastern oyster): 111136502
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Entry
111136502 CDS
T09197
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111136502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111136502
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111136502
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111136502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-rbx1
zf-C3HC4
zf-RING_2
zf-RING_11
ZNF512_C2HC
zf-ANAPC11
zf-UDP
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
111136502
NCBI-ProteinID:
XP_022343096
UniProt:
A0A8B8ET17
LinkDB
All DBs
Position
5:complement(52688577..52696574)
Genome browser
AA seq
745 aa
AA seq
DB search
MTAPSKSVVVWEWMNEYGRWRPYEPQIANFIETSHRKNPSVQVNLGKVAPHMGIYSIDFL
TMCQIRFGTGTARPVRRQLLASSSPPGKGIIWQWEGDVRGQWNTFDMEVACLLEDHFSNP
STQNTELNLSKTAVKLPYIMDLSRMTQKRIETGRLRMIRRELLAMPYMNCNPLDSSGSGS
ANPVQAADTTAVSGSGVKHRKLSGTGQSTSLSAGTSHNSVGPQQTSSSAMLKNSNVAAHN
SHSALYNNSNTAPHSSNATSVNLNMVSHSLSSASHNANTSQNFNAASYHSNGVPHNMNAI
SHNSNTASQNMNVTSHNLNPAPYNLSGTSQGSGLTGGPLTRKRLYSHMNSNSSLPTSMHM
NSVSHPVSQSHQAANQNASIFPHSQSVTNQSPASAAGFSAVGFPHGNIFQRAASFFHGNI
SHNSTQPLPLPARTVMAGSSYGNMNYHSFNNHQMGGSVAQPGLSSSAANVMLSGSASVAG
NLPATSSGATGRTTGFYLPPQDRIPNHAQRQSLSSSSWAGLEEFVNYMSVLDNPPDDEDC
CICCEKLTHASGYGEGKADGKVVFKLNKCSHRFHKLCILALYENTTKNGSVQCPTCKTIY
GEKHGICPEGVMEHLTVPHSLPGHEGHQTRVIIYHISPGIQGPEHPHPGKRYSCRGFPRV
CYVPDSDKGRKVLKLLIVAWKRRLTFTIGQSSTTGESDTVTWNEIHHKTESGRNHSGHGY
PDNKYLDNVLMELSVQGVTEADLSP
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaccatccaaatctgttgtggtttgggaatggatgaatgaatatggtcggtgg
cgaccttatgaacctcaaatcgccaatttcatcgaaactagtcatagaaaaaacccatca
gttcaagttaatttgggaaaagtggctccacacatgggcatatattccatagattttctt
actatgtgccagattcgttttggaacagggacagccagaccggtgaggcgtcagctatta
gcgagctccagcccccctgggaagggcattatttggcagtgggagggggatgttcgcggc
cagtggaacacttttgacatggaggtagcctgtctgctagaagaccacttctctaacccc
tcaactcaaaacactgaactgaatctctccaaaactgctgtcaagctaccgtatatcatg
gacttaagtcgtatgactcagaaaagaattgagacgggaagattgaggatgattaggcgt
gagctgcttgctatgccgtacatgaactgtaatccattggactcgtctggctccggatca
gccaacccggtgcaggctgctgatactactgccgtcagtggctctggtgtgaaacatcgc
aaactatcaggaactggacagtccacctctttgtctgccgggacttctcataactctgta
gggccgcagcaaacctcaagtagtgcaatgttaaagaactccaatgtagcagctcacaat
tctcacagtgctttgtataacaactcgaacactgcacctcatagctcaaatgcaacatct
gttaatttgaatatggtgtctcatagcttaagttcagcatctcacaatgcgaacacatct
caaaactttaatgctgcatcttaccattcaaatggagtacctcacaatatgaatgcaata
tcacataactcaaacacagcatcacaaaacatgaatgtgacatctcacaacttaaatcca
gcaccatacaacctgagtgggacgtctcagggttcgggattgaccggcggaccactcacc
agaaagaggctgtactcgcatatgaactcgaattcctctctccctacctcaatgcacatg
aactcagtgtctcatcctgtttcacagtcacatcaagcagccaatcagaatgcttcaatt
tttccacattctcagtctgtgaccaatcagagccctgcttcagctgcgggattctcggca
gtgggattcccacacggcaacatatttcagagagcagccagcttctttcacggaaatatc
tcccacaattccacacagcccctccctctaccagccagaactgtcatggccggcagtagt
tatggtaacatgaactatcatagttttaacaatcaccagatgggtggatccgttgctcag
ccaggtttatcaagttctgctgccaatgtgatgttgtctggttctgcctcagtggctggt
aacctgcctgctacatcaagtggtgctacaggaagaaccactggattttatcttccacct
caagatagaattcctaatcatgcccaaaggcagagcctctcatcatctagctgggcgggg
ctggaggagttcgtgaattacatgtcagtcctggacaatccacccgacgatgaggattgc
tgtatttgttgtgagaagctgacacacgcctcgggctacggagaaggcaaggccgatggg
aaggtggtgttcaagctcaataagtgcagccacaggttccacaagctgtgtatcctggcc
ctgtatgagaacaccacaaaaaatggctcggttcaatgccccacgtgtaaaactatctac
ggggagaagcacgggatctgtccggagggggtgatggagcacctgacagtcccccactcc
ctccccggacacgagggtcaccagaccagggtcatcatctaccacatctccccggggatt
caggggcctgagcacccccaccccggcaaacgctactcctgccggggtttcccgcgagtg
tgttacgtcccggacagcgacaaaggcagaaaggtgctgaagctgttgatcgttgcctgg
aagcgacggctgaccttcaccattggacagtcaagcaccacgggggaatcagacacggtc
acctggaacgagatccaccacaagacggagtccgggcggaaccactcgggtcacggttac
cctgacaacaagtacctagacaacgtgttgatggaactcagtgtgcagggggtcacagag
gctgacctgtcgccatag
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