Crassostrea virginica (eastern oyster): 111136551
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Entry
111136551 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q4-like
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvn03032
]
111136551
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111136551
Enzymes [BR:
cvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111136551
DNA replication proteins [BR:
cvn03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
111136551
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
111136551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
zf-CCHC_3
zf-CCHC_5
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
111136551
NCBI-ProteinID:
XP_022343192
UniProt:
A0A8B8ETE2
LinkDB
All DBs
Position
5:17287256..17368526
Genome browser
AA seq
1337 aa
AA seq
DB search
MEEQDIKGLKTILKKWEIKFYKENGCKPQRDEIKKAPQEIQDAYMQYNKLKKVLNVSQSN
DVSKKNDVDDHKNEMKEGNNEFQSNAQDGVWGVEFNKSNQCTQLNYEMPSDKKEPEASDF
MFKLSSKMFEMAKKDISTTKKNLSKWKPCEKKGVESIPEDSFIVKGRMLSNLKIKDKTEI
KMGSNDLEDISVSKKYNMKAKKKFSISXSRKSEEMEETEGPKSSIPDLTTRSAAKSMNEF
DEVDGLGCAVFDSEMSNKLVTQGKEQGHEYKRLDNQSTRISRMSVKHEEDAKNLSMNEST
EFRDIKWDNETTEFEVLDNGRITKTTSLQERNEKNSDIIKDESSIGGSDYNDKSKLSEIV
VDENEDVAIIPKQRKKRKTTDISSQSKKRKLESGEALDVDGEEETAPVKPKGASISRSKA
PSSVGNFVKLNMKVKTYKRKGKGMTGPQYKRFQWKQKMKSRSESYGNNCFKCGKPGHWAN
KCPSDNKESFGGEMDSVTVDEEDFPSLKEAAMMAKGIKMNKPAKSKRTSQKDKTETAMSV
KEGEEADLNNINWNEDIDPENELDEDLEIEAGIVRTTKEDTGVPAPHTPVLTDEEYKTQG
TLSFIMKGLKKFGYEAFRPGQEHAVKRILAGLSTLVVLSTGGGKSLCYQLPAYLYAQKSK
AITLVISPLVSLMEDQVTGLPPGVKGACLHTNMTTAQRESVLQNVKEGKVHFLLVSPEAV
AGGGMALLNNRSSLPSIAFVCIDEAHCLSEWSHNFRPSYLRLTKVLREKFGVQCFLGLTA
TSTLSTSQDVAKHLGISDNDNAIIRGSPVPKNLLLSVSRDENRDEALIGLLQGDRFSSCE
SIIVYCTRRQETDRLATLIRTCLKDYKAEDWDQKPKKGKAKTYAFWDAESYHAGLTPAQR
KRVQNAFMSGRLRVVVATVAFGMGLDKSDVRGVIHYNMPKSMEGYVQEIGRAGRDGKTSH
CHLFLDSEGQDLCELKRHIYANTVDYRTLKKFVQNVFVPCHCKQVHQLQQDGSRSPIKVD
NRQGPDRICHGHERXAIIDSLVMDMDVKEEGISTLLCYLELHPQRWIENLVSVYGTCKVQ
CYGGPSQLQAVAQKCPPVAVAIAKAKKDGKTFSSANQIEFPVVDISDCMGWDSGLVKKEL
KSLSWSITKHGPQKTGVLVEFSNLAFHFIAPGDLSDEEFDDVLQFLHERIQKHEKSEIQL
LRYLNESLKSVSHKNFWMCADALDEGKNKKLKEIINDYFEEQKILDQFKQKEADISEAQP
SQQEISQALADIRQLIGVHGHEHRFNGRAVARIFHGISSPCFPAQTWGRARRFWRSNMNL
DFNVLVRLAVQEIVKLR
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaggatataaaagggctgaaaacgatcctcaaaaagtgggaaattaaattt
tataaagaaaatggatgtaaaccacaaagggatgagattaaaaaagcaccccaggagatt
caagatgcttatatgcaatacaacaaattgaaaaaagttttaaatgtttctcagagcaat
gacgtgtctaagaagaatgatgtggatgaccataaaaatgaaatgaaagaaggcaataat
gaatttcaaagtaatgcacaagatggagtttggggtgtggaattcaataagagcaatcag
tgcacacaattaaactatgaaatgcctagtgataagaaggaaccagaggcatcagatttt
atgttcaaattaagttcaaaaatgtttgaaatggcgaaaaaggatatatcaaccacgaag
aagaatttgtccaaatggaagccatgtgaaaagaaaggagtggaaagtattccagaggac
agctttatcgttaaaggaagaatgctaagtaacttgaaaataaaagataagacagagatt
aaaatgggatcaaacgacttggaagatattagtgtttcaaagaagtacaatatgaaagcc
aagaaaaagttctcaatttccntcagtagaaaatctgaggaaatggaggaaactgaagga
ccaaagtcatccatacctgatttgacaactagaagtgctgccaaatccatgaatgagttt
gatgaagtggatggacttggttgtgcagtatttgattctgaaatgtccaataaacttgtt
actcagggcaaagagcaaggccatgaatataaaaggttagataaccaaagcacaagaatt
tcaagaatgtctgttaaacatgaagaggatgccaagaatttgtccatgaatgagagtact
gagttccgagatataaaatgggataatgaaaccactgaatttgaagtacttgataatggc
agaatcacaaagacaaccagtcttcaggaaagaaatgaaaagaatagtgacattataaaa
gatgaaagcagcataggagggagtgactataatgataaatcaaaattgtctgaaatcgta
gttgatgaaaatgaagatgttgctattattccaaagcaaagaaagaaaaggaagacaaca
gacattagttcacagtccaagaaaagaaaactggaaagtggggaggctctggatgtagat
ggagaagaagaaactgctccagtgaagccaaaaggagcatcaatatccagaagcaaagcc
ccatcttctgttggaaattttgtgaaactgaacatgaaggtcaaaacctataaaaggaag
ggcaaaggcatgactgggccgcagtacaagaggtttcagtggaagcagaaaatgaaatcc
cgcagcgagagttacggcaacaactgcttcaagtgtggcaaaccagggcactgggccaat
aagtgtcctagtgacaacaaagagagttttggaggagagatggattcagtgactgtcgat
gaagaagatttcccaagtctgaaggaggcagccatgatggctaaagggataaagatgaat
aaaccagcaaagagcaagagaaccagtcaaaaggataagactgagactgccatgagtgtg
aaggagggggaagaggctgatctaaacaacattaattggaatgaagatattgatccagaa
aatgagttagatgaggacctggaaatagaggcaggtattgtgaggacaactaaagaggat
acaggagttcccgcccctcacacacctgtacttactgatgaagagtacaaaactcaagga
actcttagtttcatcatgaaaggattgaagaaatttggttatgaagcattcagacctgga
caagagcatgctgttaaaagaattttagccgggttgtccactctggttgtactgtcgaca
ggaggtggtaaatccctatgttatcagctaccagcctatctgtatgctcaaaagtcaaag
gccatcaccttggtgatctcccctctcgtctcacttatggaggaccaggtaacaggtctt
cctcccggtgtaaagggagcctgccttcatactaacatgacaacagcacagagagaaagt
gttctccagaatgtcaaagagggcaaagttcacttcctgttggtgtcccctgaggcagta
gctggaggggggatggccctcctcaataacaggtcctccctcccctcaatagcttttgtg
tgcattgatgaggcccactgcttgtccgaatggtcccacaacttcagaccttcttatctt
agactcacaaaggtgctcagagaaaagtttggagtacagtgtttcctgggactgacagcc
acttctaccttatcaacctcgcaggatgtagcaaagcatcttgggatatcagacaatgat
aatgccatcatacgtgggtcaccagtgcccaaaaatctgcttctgtcggtgtccagagat
gaaaacagggatgaagcattgataggtctccttcagggtgaccgattctcgtcctgtgag
tcaatcatcgtatactgtaccaggcgacaggagacggatcgtctggccaccctcatccgc
acctgtctcaaggattacaaggcagaagattgggatcagaagcccaagaagggtaaagct
aaaacttacgcattctgggatgcagagagctaccatgctggcttaacaccagcgcagcga
aagcgggtgcagaatgctttcatgtcaggcagactcagggtagtggtagctacagtggcc
tttgggatgggactggataaatcagatgtgagaggagtcatccattacaatatgccaaag
agcatggagggctatgtgcaggagatagggagggccggtcgagatgggaagacttctcat
tgtcacctcttcttggattctgagggacaagatctctgtgagctaaagaggcatatctat
gccaatacagtggactacaggactctgaaaaagtttgttcagaatgtatttgttccttgc
cattgtaaacaagtgcatcagctgcagcaggatggctcaaggagccccatcaaagttgac
aacagacaaggtcctgatcgaatctgccacggacacgagagancagccattattgacagc
ttagtaatggatatggatgttaaagaagaaggaatatccactttattgtgctatctggag
ctgcacccacagagatggatagagaatctggtcagtgtgtatggaacatgtaaagtccag
tgttatggtgggccgtcccaactacaggctgtggcccagaagtgtccacctgtggctgta
gccattgcaaaagcaaagaaggatgggaagactttttcatcagccaatcaaattgagttc
cctgttgttgacatcagtgactgtatgggctgggattcagggttagtcaaaaaggaactg
aagagtctctcctggagcatcacaaagcatggtccccagaaaaccggtgttttggtggag
ttctcaaacctggcctttcatttcattgcccctggtgatctgtcagatgaagaatttgat
gatgtgctgcagttcctccatgaacgaattcagaaacacgagaagtctgaaattcagctt
ctaagatatctcaatgagagtttgaaaagtgtgtcacataagaacttctggatgtgtgca
gatgccctggatgagggaaaaaataaaaaattaaaggagataattaatgattacttcgaa
gaacaaaagattctagaccaattcaagcagaaggaagcagatataagtgaagcacagcct
tcgcaacaagagatctctcaagccttggcagacatacggcagttaatcggagtccatggc
catgaacacagatttaatggcagagccgtggcacgcatcttccatggaattagcagtcct
tgcttcccagcacaaacctggggtcgtgcaagacgcttttggagaagcaacatgaacctc
gacttcaacgttttagtccgtcttgctgtgcaagaaattgttaagctaaggtga
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