Crassostrea virginica (eastern oyster): 111136576
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Entry
111136576 CDS
T09197
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111136576
Transcription factors [BR:
cvn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111136576
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111136576
NCBI-ProteinID:
XP_022343230
UniProt:
A0A8B8ETE6
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Position
5:complement(72311642..72313642)
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AA seq
327 aa
AA seq
DB search
MEYPADPQDQDLPKPGQTHLPPSSQGMHVPVNPHGMHGSHPHGQQSQQQHSPNPQTNLNG
SGGGSPNSGASKKDADRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLS
EAEKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKTLMKKDKYALPGMPTGAPLQPGRDGQ
MYPMAGYMPNGYAGMMHDPNAYMNQMVGQYGYMQSQQMPGNQMTSGSYMNGSSSYTMSMA
GMAPYPPMSPSQIPGGVKREPTPGSGPQGPGRPTNPGDLREMISMYLPTGDGSDPHSAQQ
RLMHQAHYQPPPSSETGVNNTVPLTHM
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggaatatccagctgaccctcaagatcaggacttaccaaagcccggacagacacatcta
cccccatcttcccaaggaatgcacgtgccggtcaacccacacgggatgcatggctcccac
ccgcacggacagcagtcccaacagcaacactcgccgaacccccaaaccaacctcaatgga
agcggaggtggttctcccaactccggggccagcaagaaggacgcagatcgcgtgaagcgc
cccatgaatgccttcatggtgtggtctcgcggccagagacgaaaaatggcccaggaaaac
ccgaaaatgcataattctgaaataagtaagagacttggtgcagagtggaagttattatcc
gaggcagaaaaacgaccgtttatcgacgaagccaagagacttcgtgctatacacatgaag
gagcaccccgactacaaatacagaccaagaaggaaaacgaaaacactgatgaagaaggac
aagtacgctctccccggcatgccaacaggtgcccccttacagcccggacgggacggacag
atgtatcctatggcaggatacatgcccaacggatacgcgggaatgatgcacgaccctaac
gcatacatgaatcaaatggtgggacagtacggatacatgcagtcccagcagatgcccgga
aaccagatgacatcgggatcctacatgaacggaagttccagctacacaatgtccatggcc
ggaatggccccttacccacccatgtctccttctcagatccctggcggcgtcaaacgagaa
cccacccccggttctggtcctcaggggcccgggcgacccacaaaccccggagatttacgt
gaaatgataagtatgtacctacctaccggagacggttccgatcctcatagtgctcaacag
agactcatgcaccaagctcactaccagcctcctccttcctcagaaacaggggtgaacaat
accgtaccgctaacgcatatgtaa
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