Crassostrea virginica (eastern oyster): 111136595
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Entry
111136595 CDS
T09197
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111136595
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
111136595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
TPR_2
ResIII
TPR_1
AAA_34
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
111136595
NCBI-ProteinID:
XP_022343267
UniProt:
A0A8B8ETM4
LinkDB
All DBs
Position
5:complement(38208090..38230756)
Genome browser
AA seq
1905 aa
AA seq
DB search
MEEDACEGLHNLSISEESTLAQCIQEKYSWLILQSKELVSKGNVQEALKLNQKAYRLCPS
EKLQRKIQRMQAYVKENSNEIDHTESTDRSSVKSSRIERSSSSSSNNGGLSSDPSPKSSD
PSPHSTGPSSLASPSQQALQSLSEEDQVQYAMLISEARQLVEKKDIPQALHLNRKALKIL
PSEKLQRKIQRMEMYIQQNNLSEVSQSSDENSDEKMSSLKSGSTTSVSTVDEKSGENSEE
ADSAKYARLISEAKELTSDGEVKAALDLYKEAAKICPSEKLTRKMERMEEYLRQNECTNE
NTVVSDSSKTEDNESIESTPLQEQTPASAETENQYSQLVSRAKDLTADGHVKEALSLYRL
AADLQPSDKLSRKMERMEEYLRQSGIPIDDEDKKDMECEEPEPVCENEPPTQDKTPLTER
APPQDRIPPVDKAPPQDRIPSVDSTPLASRDRDVTSLSEEDQVQFLTLVSGAKEEMRQGR
AAEALRSYKQAAQIYPSDKLQSKIQKLEAFLKESQTSNETSNVNHVNSPKRTPSRRPSGN
NQSGSLSMDQQRKYNDLVMKAKTLATNGSIREALECNKKALAICFSEKLNKRIQKMESYL
ASNDDDEGEEGENGGMVPLGNGFYLFKDLMKNLYAHQKEGVLWMWGLHQKRKGGILGDDM
GLGKTIQVISFLSGLFDMEKVHSVLIVMPVSVIGNWEKEFGKWAPGIKVESYHGSKKEKE
RSLAKIRRKGGVLLTSYGLVVTSWEMMSQQDGRPFRWDYLILDEGHKIKNPTKTTKGVHQ
IPAAHRILLTGTPIQNNLREMWSLFDFVHQGTLLGTARTFKMEYENPITRARERDATANE
RRLGMEMAESLKQIISPYFLRRTKAEVANKEEESEGDLNTSASRKTLNYGKDLRMPSMTR
KNDFIIWLFLTPDQQRIYGDFLSLDSVKELLMTKKSPLVALTVLKKICDHPRLLSRRACA
QLGLDGEHGLNDSALESEEGHQCAANQIKNMPDNVLIQESGKLIVIMDLLDQMKREGHRC
LVFSQSRKMLDIIYQLINNRGHKVMRLDGTVTQLSERDKRIATFQEDLSYSVFLLTTQVG
GVGLTLTAADRVIIYDPSWNPATDAQAVDRVFRIGQDKNVVIYRLITCGTVEEKIYRRQI
FKDSITRQTTGNTKNPYRYFTKQELKELFTLDNPRISKTQQQLEEMHSQQRKTDSSLDAH
IAFLYSLDIFGISDHDLMFTQEKCDFEDEGEAEVDPGTDYIQHRVQKAKELLQMESDLTQ
DFEQRSGKYPRNVPSEESGSQKPFSRPWGDWNLQGTVHSQEEGEEDVKDVQEVDIDAEGN
SEEEEEDEEDDVQEVKRELETSHIDLVTPEPTPVKASAVVDLTASATKPTARIKLEPESP
MSVIKREAEDQEEIQMEDVSPVPNLEKAEESEEEVQAIERIENLSIQASPTSTSKTNQSV
TENEDLQSSSHEEVMQIGQQEELSDETENYDHSITEKSGSDKMEESIMVSEDEENKENVP
LSQIIATAKRSSDSFKLNRSVDGQPRSPLAPIILSPVVTDSPAKKKPRRSVSQSPWLKHS
PAKKDVKVVREEEVFISPDRFRPLMGTTSKGLQEKFKSRSNLNSTILSAFSDSPQSPYSS
IRKETFNDSPLEGKRVTSRLQETLVEESPDRLGASAGLQTSFVPNSLDNTPNVSLSAKNI
SKDSSIAIGETDDESSPQKSLTVSKSDSVVESSILDEEEDEQVDDSDPLDDQSEVDIDSD
DNDLPSLSVKKKKVRKAVIISDSESENNDENYEEEVEEAMDSVQKENRKKRKSSESNSLP
QSKYAMLSSSDNEQSEDQEDMRSNEGSVDDEESIDIDVDSEDEDFQELPEELQDQYCLAT
RKAKELYKSCMYEECLVYVLQALEIYPENTALQAFALQVHSKKDQ
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatgcctgtgagggactgcacaatttatccataagtgaagagagcactctt
gcccagtgcattcaagagaaatactcctggctaattcttcaatcgaaagagttggtttca
aaaggaaatgtacaagaagctttaaaactgaaccagaaggcctatagactatgtccatca
gagaaactacagaggaaaattcagcgtatgcaggcatatgtgaaggaaaattccaatgag
attgatcatactgaatcaactgacagatcatcggtcaaatcttctagaattgaaagatct
tcctcaagttcctccaacaatggaggtttatcctcagatccctcccctaagtcttcagac
ccctccccccattctacaggcccctcctctctggcctccccatcccaacaggccctacaa
agcctctctgaggaggaccaagttcagtacgcaatgttaatatcagaggccaggcagctg
gttgaaaagaaggatatcccacaggctcttcatctcaacagaaaggctctgaagatctta
cccagtgaaaagttacagcgaaagattcaacgtatggagatgtatatccaacagaacaat
ttatctgaagtttcacaaagttctgatgagaatagcgatgaaaaaatgtcaagtttgaaa
tcaggttccacaacatctgtatccactgtggatgagaaatctggtgagaattccgaggag
gctgactcagcaaagtatgctagacttatctctgaggccaaggaactaacctcggacggt
gaagtaaaggctgccttagacttgtacaaagaggcagcaaaaatctgtcccagtgaaaag
cttacgcgcaaaatggagagaatggaggagtacttaagacagaatgaatgcacaaatgaa
aatactgtggtttcagattctagcaaaacagaagacaatgaatctattgaatcaactcct
ctccaagaacaaacaccggccagtgctgaaacagagaaccagtacagtcagctggtctcg
cgagctaaggacctaacggcggatggccatgttaaagaagctcttagtctgtacaggctg
gcggctgacctacaaccaagtgacaaactgtctcgtaaaatggagagaatggaggaatac
ttgagacaaagtggcattccaattgatgatgaagacaagaaagatatggagtgtgaggaa
ccagagccagtgtgtgaaaacgagcccccaacacaagataaaactccgctcacagagcgg
gcccctccacaagataggattccccctgtagacaaggcccctccacaagacagaatcccc
tcggtagacagcaccccactggcctccagggacagggatgtcacctccctcagtgaggag
gaccaggtccagtttttgaccctggtgtctggagccaaggaagagatgaggcagggtcgg
gcggccgaggctctgcgctcctacaaacaggctgctcagatataccccagcgacaaacta
caaagcaagatccaaaagctagaggcgttccttaaagaatctcagacttcaaatgaaacc
agtaatgtaaaccacgtgaactccccaaagagaactcccagcagaaggccttctggaaac
aaccaatcaggatctctctctatggatcagcagaggaaatacaacgaccttgtaatgaag
gccaaaacactggcaacaaatgggagcatcagagaagccttggaatgtaataaaaaagct
ctggctatctgcttcagtgagaagctcaacaaaagaattcagaaaatggagtcttacctt
gccagtaatgatgatgatgaaggtgaagagggggagaatggagggatggttccccttggg
aatggcttctacctgtttaaagacctgatgaaaaacctgtacgctcaccagaaggagggc
gtcttatggatgtgggggctccatcagaaacgtaaaggaggcatcctgggggacgacatg
ggcttgggaaagacgattcaggtgatctccttcctgtccgggttgtttgacatggagaaa
gttcactcggtgctaattgtaatgccagtatccgtcatagggaactgggagaaagagttt
gggaaatgggcccctggtattaaagtggaatcgtatcatggctcaaagaaagaaaaagag
cgatcattggccaagatccggcggaaaggtggggtactgctgacctcatatggcctggtg
gtcaccagctgggagatgatgagtcagcaggatgggcgaccattcagatgggattaccta
attttggatgagggtcacaagatcaaaaacccgacaaagacaaccaaaggggtgcatcag
attccggcagcccatcgaattctgttgactggtacccccatacaaaacaatcttagggag
atgtggtcactatttgactttgtccatcaaggaacactgttagggacagcaagaaccttt
aagatggaatatgagaatccaatcaccagggccagggagagagatgctacggctaatgag
aggagacttggaatggagatggccgagagtctgaaacagattatctccccttatttctta
cggagaaccaaggctgaggttgctaacaaggaagaggaatcggagggggatctgaatacc
tccgcatcacgaaagactctaaattatggcaaagacctcagaatgccttccatgacccgg
aagaatgacttcatcatctggttgtttttgacaccagaccaacagcggatatatggagac
tttctgtccttggattctgtcaaagagttgctgatgaccaagaagtcgcctttggtggca
ctgacggttctgaagaagatctgtgatcacccacgcctgctgtcccgcagagcttgtgct
caactcggattggatggagaacatggtcttaacgattcagccctggagtcggaggaggga
catcagtgtgcagccaatcagattaagaacatgccagacaatgtgcttatacaggagtct
ggaaagctgattgtcattatggacttgttagatcagatgaagagggagggccaccgatgt
ctcgtcttctctcagtccaggaaaatgttggacattatctatcaactgatcaacaacagg
ggacacaaggtgatgagactggatggcacagttactcagctgagcgagcgagacaagcga
attgccacattccaagaggacctgagttactctgtatttctgttgacaactcaggttgga
ggagttggtttgaccttaacagctgctgaccgagtcatcatttatgatcccagttggaat
cctgcgacggatgctcaggctgtggaccgagtgttccgtattggacaggataaaaatgta
gtcatctatcgtctgattacctgtggaactgtggaggagaaaatctaccgccggcagatc
ttcaaagactccatcactcgccagaccacagggaataccaaaaatccatacaggtatttc
acaaagcaggaactgaaggagttgtttacccttgacaatccgcggatctctaagacccaa
caacaactggaggagatgcacagccagcagaggaagacggactcatccctggatgcgcac
attgcattcctgtactcgctggatatatttgggatcagtgaccatgacctgatgtttact
caggagaagtgtgactttgaggacgagggggaagcagaggttgacccagggacagactac
atacagcacagggtacaaaaagcaaaggagctcttacaaatggagtcagatttgactcaa
gactttgagcaaagatctggaaaatatccaagaaatgttccctctgaggaatcaggatct
cagaaacccttctcccgaccctggggggactggaatctccagggaactgtccattcacag
gaagagggggaggaagatgtcaaggatgtacaagaggttgacatagatgcagaaggaaat
agtgaagaggaagaggaggatgaagaagatgatgtacaagaggtcaagcgcgagttggaa
accagtcatattgaccttgtgaccccagaaccaaccccagttaaagctagtgctgtggtg
gatcttactgcgtctgccaccaaacctacagcaagaatcaagcttgaaccagaatcacct
atgtctgtcatcaaaagagaagctgaagaccaggaagaaatacagatggaagatgtaagt
cctgttccaaaccttgaaaaagcagaggaatcagaggaagaggtgcaagctattgaaagg
attgaaaatctatctattcaggccagtcctacaagcacctctaaaaccaaccagtctgtt
acagagaatgaagacttgcaatctagttcccatgaagaagtaatgcaaattggacaacaa
gaagagctcagtgatgaaacggaaaactatgatcattctattacagagaaatcaggcagt
gacaaaatggaggagtccatcatggtttcagaagatgaggaaaataaagaaaatgttcct
ctctcacagataattgccacagctaagaggtcgtcggattctttcaaattgaacagatct
gtggatggtcaacccagatcacccttagctcccatcatcctctcgccagttgtgacggac
tcccctgccaaaaagaagcccagaagaagcgtgtcccagagtccctggctgaaacattcc
ccagccaaaaaagatgtcaaggtggtgcgagaggaggaggtgtttatctcccctgacaga
ttcagacccttgatgggaacaacatccaaaggcttacaagaaaagttcaaaagtagaagt
aacttaaattctacaattttatctgctttttctgatagtcctcagtcgccgtattcttca
attagaaaggagacatttaatgattcacctctcgaagggaagagagtcacctcaaggtta
caggaaactctagttgaggaatctccagatcgtcttggtgcttcagctggactgcagaca
agctttgtacccaattccctggataatacaccaaatgttagtctttctgccaaaaacatt
tcgaaagatagcagtattgccattggagagacagatgatgaatcttccccacaaaaatct
ttgacagtttctaaatctgacagtgttgtagaatccagcatactggatgaagaggaagat
gagcaagtggatgacagtgatccattagatgaccagtcagaggttgatatagattctgat
gataatgacctaccaagtctttcagtgaaaaagaagaaagttagaaaagctgtcattata
agtgattcagagagtgaaaacaatgatgaaaattatgaggaggaggtagaggaggctatg
gacagtgttcagaaagagaatagaaagaagaggaagtcatcagagtctaacagcttgcct
cagtcaaagtatgccatgttgtccagctccgacaatgaacagtctgaggaccaggaggac
atgaggagcaatgagggctcagtggatgatgaggagtcaatagacattgatgttgatagt
gaggatgaagattttcaagagcttcctgaagaattacaagatcaatattgtttagccaca
agaaaagcaaaggagttgtataagtcctgtatgtatgaagaatgcctagtgtacgtttta
caagctctggaaatctaccctgagaatacagctcttcaggcctttgctctacaggtgcac
tcaaagaaagatcaatga
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