Crassostrea virginica (eastern oyster): 111136615
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Entry
111136615 CDS
T09197
Name
(RefSeq) nuclear pore complex protein Nup93-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111136615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111136615
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111136615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
HCR
PoNi_N
Motif
Other DBs
NCBI-GeneID:
111136615
NCBI-ProteinID:
XP_022343299
UniProt:
A0A8B8ETL9
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Position
5
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AA seq
845 aa
AA seq
DB search
MRMRYRIFSHGGLFTHVKVKQEMETDIADFSDLQHQAEQLTAEFDTASDLPRVNRNIAQI
LEAGSRLLSKVAPISQDTTDVRASILLGTKGYDVPKISQKLEGLSASKTFEPLEPVKDTD
IQSFLKNERENALLAIIEQTRKHTFEESERRHWECMENEWEREKQKILNTLRGMNQDTTD
FQPEAESFAVDPVSMHGRSNLNNIEMAYARQVYMYNEQVLQGSIRPSLVDAFSDVATSLD
DKPMMDLWEQVRYMVDVPLVSTNNVKDSRTDYRTQAAFVQKGREYLEQMYSKHIQSTIYS
NLQQAQLGGIPSTYNQVKSYLNVRPPHIKGLEDGQVDGHPVWAMIYFCLRCGDLQAALQV
TEKASHNLGDFPAFLREYVTDEDNRLSAASETRINLHYRRIIKNGNDPYKRAVFCVIGRC
DPTEDHSEVADKIDDYLWIKLSQIQVDLDPSRQDGFTLQRLQSLLYEDFGESHFNAYQNP
FLYFQILILTAQFEAAIEFMSRIDRLLCHAVHVALVLYELKMLLLPMSTQAQLLTKESSD
EGPLRRLNFVRLITMYTRKFETTDPREALQYFYFLNNLRTSQGENLFMSCVSELVLETRE
FEMLLGKMEPDGTRRLGAIDKFHHDTQRIIELVARDTENKGMFEEAVMLYDLGEKHDKVL
ELLNRLISQVVSQPNTPQSSRDRLRSTALSIAKRYREGKNEGSRSNTSTFYLLLDLLTFF
DYYHEGNVDEAFEVMKQLKLLPLTADVVEHKVNAFRHYTDEVRRCLPDILIATMNILHNQ
YKTPKNSAPRGGYSGQGRSEDGGRETYLNYLRSQARALIMFAGMLPYRLPGDTNARLVQI
EVLMN
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgcggtatagaattttttcgcacggcggcttatttacacatgtgaaagtaaaa
caggagatggagacggatatcgctgatttctctgatcttcagcatcaggctgaacagctg
actgccgagtttgacactgcctcagacttaccacgcgtcaacaggaacatcgcccagatc
ctagaggcaggatcgcgactgctgtcaaaagtagcccctatcagtcaggatacaacagat
gtcagggcgtctatattgttgggaacgaaaggatacgatgttccaaaaatttctcagaaa
ctagagggcctcagtgcctccaagacatttgagcctctggagccagtaaaagacactgat
attcagagtttccttaaaaatgagagagagaatgctttattggccataattgagcaaacg
agaaaacatacctttgaggagtcagagaggagacattgggagtgtatggagaatgaatgg
gagagagagaaacagaagattctcaacacattgcgaggcatgaaccaggatacaaccgac
ttccaaccagaggccgagagttttgctgtggatcctgtcagtatgcatggaagaagtaat
ctcaacaatatagagatggcgtatgcaagacaggtctacatgtacaatgagcaagtactc
caaggcagcatccgacccagtcttgtggatgctttctcagatgtagctactagcctggat
gataagcctatgatggacctgtgggaacaggtgagatacatggtggacgtccctctggtt
tccaccaacaatgtcaaggactcccgcactgactaccgaacacaggccgcgtttgtacaa
aaaggccgggagtaccttgagcaaatgtattccaaacacatacagagcacaatctacagt
aatctccaacaggcccagctgggggggattccctccacatataaccaggtcaagagttac
ctcaacgtccgcccccctcacatcaaggggctggaggacggacaggtggacggacaccca
gtgtgggccatgatctacttctgtctgaggtgtggagaccttcaggctgccctacaggtc
acagaaaaagcatcacacaatcttggggactttcctgcttttctcagagaatatgttact
gatgaagataacaggttgtctgctgccagtgaaaccaggattaatcttcattatcgcaga
atcatcaaaaatggcaatgatccttacaaaagggctgtgttctgtgtcattggccgatgt
gatccgactgaagaccattccgaggtggcggataaaatagacgactacctgtggataaag
ttatcccagatccaggtggatttggatccatccagacaagacggatttaccctccaaagg
ttgcagagtctcttgtatgaagactttggtgagagccatttcaatgcataccagaatcct
ttcctttatttccaaattcttattctaactgctcagtttgaggcagccattgagttcatg
tcccggattgatcgtctcctctgccatgctgtgcatgtagcactggttctgtacgagctc
aagatgttgctactccccatgtccacacaggctcagcttttaacaaaggaatcttctgat
gaggggccgctaaggagacttaattttgttcgtctaattaccatgtacacgaggaaattt
gaaaccacagaccctagagaggctctccagtacttctatttcttgaacaatctcagaacc
tcacaaggagaaaatctctttatgtcttgtgtcagtgaattggtgttggaaacaagagag
tttgagatgttactggggaagatggagccagatggcactagaaggttaggggcaattgat
aagtttcatcatgacacccagagaattatagaacttgttgccagggatacagaaaataaa
gggatgtttgaggaagctgtcatgttgtacgatttaggggaaaagcatgacaaggtgttg
gagctgctgaatcgactgatcagtcaggtggtatcccagcccaacaccccccaatcctcg
cgggacagactccgaagcacggccctcagtatcgccaaacggtatagagaggggaaaaat
gaagggtcaaggtcaaacaccagcacattttaccttttgcttgacctgttgacctttttt
gactattatcacgagggaaatgtggatgaagcttttgaggtgatgaagcagttgaagctt
cttccactgactgctgatgtagtggaacacaaagtgaatgccttcagacactacacagat
gaggtccggagatgcctacccgatattttaattgcaacaatgaatatactacacaatcag
tacaaaactcccaaaaactccgctccaaggggaggttactctggacaagggagatcagag
gatgggggcagggaaacgtacctgaactacctccgaagtcaagctcgggccctgatcatg
ttcgctggaatgctgccttatcgactgcctggagatacaaacgctcgcctggttcagatc
gaagtgctcatgaactga
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