Crassostrea virginica (eastern oyster): 111136733
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Entry
111136733 CDS
T09197
Name
(RefSeq) nucleolysin TIAR-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111136733
03041 Spliceosome [BR:
cvn03041
]
111136733
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111136733
Spliceosome [BR:
cvn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111136733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_Nup35
RRM_occluded
RRM_3
RRM_5
DUF4523
RRM_PARP14_3
NinE
Motif
Other DBs
NCBI-GeneID:
111136733
NCBI-ProteinID:
XP_022343528
UniProt:
A0A8B8EV24
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Position
5:62116542..62167071
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AA seq
394 aa
AA seq
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MASEETSPRTLYVGNLDPSVTETLIMALFGQIGPCKSCKIIHETTPGMREPNEEAKYGPG
YEGPVDPYCFVEFYDHGSAAAALAAMNKRMCLGREMKVNWATSPSNTPKQDTSKHFHIFV
GDLSPDIETSQLKEAFKVFGEISDCKIIRDPQTLKSKGYGFVSYVNKVDAETAISNMNGQ
WLGSRPIRTNWATRKPPAPIPKESQIKQLSYEEVYSLSSSTNCTVYCGGIGPGVTEEAIK
SAFNTYGTIQEIRVFKEKGYAFIRFSNKESATKAICGVNGTVIGENMVKCSWGKESNDPS
QSGGGGGAGSPSQMSQSASQPPGQYGGQYYNMGYSYPAAYPSYMPQQQYMPQGYGYPNGG
YQMQGMQPYGMVPPGSQQQFPGQGGMMGYPMQQE
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgaagaaacgtctccgagaaccctgtatgtgggtaaccttgaccccagtgtt
acagagaccttgatcatggccttgtttggacaaataggaccctgtaaaagctgtaaaatc
atccatgagaccacccctggcatgagggagccgaatgaagaagccaaatatgggccaggg
tatgagggcccggtggatccctactgcttcgtggagttctacgaccatggctccgccgct
gctgctcttgctgccatgaataagagaatgtgcctcggaagggagatgaaggtgaattgg
gccacatcccctagtaacactccaaagcaggataccagtaaacactttcacatatttgtt
ggtgacttgagtccagatatcgagacctcacagctgaaagaggcgtttaaagtatttggt
gaaatctcagactgtaagatcatccgagatccacaaacactgaaatccaagggctatggt
tttgtgtcctatgtcaacaaagtggatgccgagactgccattagtaacatgaatggacag
tggctgggcagtcgaccaatcagaacaaactgggccacacgcaaaccaccagcgcccata
ccaaaagaatcccaaattaagcagttgtcctatgaagaggtgtacagtttatcgagttcc
accaactgtactgtttactgtgggggaattgggcccggagtcactgaagaggcaataaag
agtgcttttaatacatatggaaccatccaggaaatccgagtattcaaggagaagggctat
gctttcatcagattttctaacaaagagtcggccactaaagctatctgtggagtgaatggc
acagtcattggggagaacatggtcaaatgctcctgggggaaggagtccaatgatcccagc
cagtccgggggaggaggaggggcaggctctccgtctcaaatgtctcagtctgctagccag
ccccctggccagtacgggggtcagtattataacatgggctacagttacccagcagcctac
ccctcctacatgcctcaacagcagtacatgccccagggttacggctatcccaatggtgga
taccagatgcagggaatgcaaccatatggaatggtacctccaggaagtcagcagcagttt
cctggacagggtggcatgatgggataccccatgcagcaagaatga
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