Crassostrea virginica (eastern oyster): 111136762
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Entry
111136762 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 1-like
KO
K16578
CLIP-associating protein 1/2
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111136762
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvn04812
]
111136762
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
111136762
Cytoskeleton proteins [BR:
cvn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
111136762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EF3_N
Cnd1
HEAT_EZ
TOR1L1_N
Tti2
UTP20
HEAT_DAAF5
HEAT_2
MMS19_C
Adaptin_N
MMS19_N
Motif
Other DBs
NCBI-GeneID:
111136762
NCBI-ProteinID:
XP_022343572
UniProt:
A0A8B8EUH0
LinkDB
All DBs
Position
1:60008390..60058849
Genome browser
AA seq
1485 aa
AA seq
DB search
MATLDSFLPNVTTQDTRKRIQAHQDLIPYLSDPHSSLSCPEMDEFIGGLVGWVNCSNYKI
SLNGLEVLCLMVDRMGEDFKIHVSSVIPAVVDRLGDSKDQVREMAQQLLLKLMMPATSPQ
FVFDRIQNSFTHKLWRVRDEVLICLQNTVNTYGARSLQLSKIVPSICKLLDDQNSQVRET
AITTLAEVYRHVGERVRQDLAKKGIPPQRLNQIYAKFDEVKHSGGMLATADFAPSHRSDD
DVDFAKPLSTKVPQAKRASSASSTASGPSTRKSMLPTNRTSSASTSLKRRRSIAGPHTSG
QSGGVDEEFFTKSFEDVPKVQIFSSRDVQDQLSKIQNLLNDTNSAWEKRCDAVRNIRAVI
IAGGMEYDDFQQSIRSLDVALISAIKDLRSQIVREACITVAFLSQRMGSRFDLLAEVLLP
NLINLIPNSAKVMASSGTTCIHFIIQYTHSARLIPILVTNLSSKSNIIRRQCFEFLHIAL
QNWNTHYLEKHIAILQDSIKRGISDADSEARVVARKSYWAFAEHFKEQADMLMNSLEPRD
QKLLNDQCSGSSSNSVSSDYAGRPRPRSASQDRSTGFDSSTLGRIGKKKHSQFSSARSDT
GAEIRSRSLKFSKEVDVSGAARHHGADVDKTLSKSVKERIIRSSSAVDLANGMSPSYSSY
ATPKRRSPQMAAAARMTPGATYSLPRHRSSSTHQNLGTLDRNSRPRNKNGSSQSQPNSRS
GSPTSRISYLTHTQKDPMTPRSVRRSGATRSQGASREGSPNRVHMQPGRERRLSGGKTLP
SSGGKRKAGVMAQRTLRHGSDVEEALTDALRAQNRRRYEYDSDDAASETSSVCSERSYRS
IGQTSESTSKDSICSPPMVESANVPKDTTEIITLLGSGSHGDRKEGLIALQNLLRSGRFL
SRVELQKVCEVFNRMFHDPHSKVLSLFLDTLVDLVQVHSQDLTNQMFPFLTRLLNKSGQD
MXGSVQNRVQRALDAVRVHFPAEHQFNALSKYIVDQTQSASLKPKVKASLLNYMHNLVLM
MNDTDFVNSXDTRLVLSRIINFTTEPKSVEVRKAAQLVLIDLFNLNAPELSMMLTNLPKP
FQDSATKILQTHMRSASRDSDVLSPKNVTPQQNRSRPPSRGHHDEMETENMNPEDIYNSI
KQTTADIQNLSFHSKLESYDPVKKKREFTSQDSGIQDLRNDSPDAVDSRKGNYNPSQYSD
EAMNGLNNRSRLADAELDDSELFNEEMINSVVLPDPWKAILGFSCSEHDESTDSDVITTI
LTELSNHNKRNNERKDAMLSLIKMTREGNFNFWDEHFKTILFVLLETLGDTNGHIRALAL
RVLREILKNQPSRFKDYTELTILRILEAHKDSEREVVRSAEECADTLANYLPPETCVRIL
NPIISTALYPVNLAAIKMQNKVLELLPKDTLEAQMGEIIPGLLRGYDDQQSTVRKSAVFC
LVAIYLKVGEGIWNHLTKLNYSKVKLLNCTSSEPSSPAVVRQHLP
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactttggattcctttcttcccaatgtgaccactcaggacacccggaagaggatt
caggcccaccaggatctgattccatacctgagcgacccacacagctccctcagctgtcct
gagatggatgagtttattggtggacttgttggctgggtcaattgttcaaattataagatt
tccctcaatggactagaagtcctatgtctaatggtagatagaatgggagaagacttcaag
atccacgtatcctcagttatacctgctgtggtggatcgattaggggactcaaaagatcag
gtgcgagaaatggcacagcagctgttattaaagttgatgatgcctgctacttcccctcag
tttgtatttgatagaatccagaactctttcacacataagttatggcgtgttagagatgag
gtgttgatttgtctccagaatactgtcaacacatatggtgctagaagtctccagctgtcc
aagattgtaccttccatttgtaagctcttggatgatcagaacagtcaggtgagagagaca
gcaataacgaccttggcagaagtgtacagacatgttggtgagcgtgtacgacaggatttg
gccaagaagggaattcccccacagagacttaatcaaatctatgcaaaatttgatgaagtg
aaacattcaggcggcatgctggctactgcagactttgctccaagccatagatctgatgat
gatgtggactttgccaaacccttgtccaccaaagtcccccaggcaaagagggcatcatct
gcctcctccactgcctccggaccgtcaacaaggaaaagcatgctccccaccaacaggaca
agctcagcctccacctccttgaagagacggcgctcaattgcgggcccccatacttcagga
caatccgggggtgttgatgaggaatttttcacaaagtcctttgaagatgttccaaaagtt
caaatattttcctccagagatgttcaggaccagttgtctaaaatccagaacctgttgaac
gataccaacagtgcctgggagaagcgctgtgatgcagtgcggaacatccgagctgtgata
atcgcaggcgggatggagtacgacgacttccagcagagcatcaggtccctggatgtggcc
ctgatttctgccatcaaagatctaagatcccagatagtgcgagaggcctgtattacagtg
gcgttcttgtcccagcggatggggtcgcggttcgatctcctggcggaggtcctcctccct
aacctcatcaacctcattcccaacagtgccaaggtcatggcctcctcgggcaccacctgc
attcacttcatcattcagtatactcattctgcacgccttatacccatccttgttactaat
ttatcttcaaaatccaacataattaggagacaatgttttgaatttctacacatagcgcta
caaaattggaatacacattacttagaaaaacacatagctattcttcaagattcaataaaa
aggggaatttccgatgcagactctgaagcaagagttgtggccagaaaatcatactgggcc
tttgcagagcactttaaggaacaggcagacatgttgatgaactctttagagcccagagat
cagaagttattgaatgatcagtgtagcggatcctctagtaattctgtcagtagtgattac
gcaggtagacctcggccccgctcggccagtcaggatcgcagcacggggtttgactccagt
accctaggtcgtattgggaaaaagaagcactcgcagttcagctcagcacgaagtgataca
ggagcagaaattaggtcacgttctcttaaattttccaaagaggtggatgtcagtggtgca
gcacgtcaccatggggcagatgtagacaaaactttaagtaagtctgttaaggaacgcatt
atccgctctagtagtgccgtcgatcttgcaaatgggatgagcccatcctattccagttac
gccacgcccaagcggcggtcgccccaaatggcggccgccgctcgaatgacgccgggagcc
acatattcactgcctcgacatcgaagtagttccacccatcaaaatcttggtaccttggac
cgtaatagtcgacctcgcaacaaaaatggtagctcccaatcgcagcctaatagtagatca
ggctcacctacttctagaatcagttacctaacacacactcagaaggaccctatgacccca
aggtcagtgaggaggtcaggggccactcgaagtcaaggggccagcagggagggtagtcca
aaccgtgtacatatgcagccagggagagagaggaggctgagtgggggcaagaccctgccg
tcctctgggggtaagaggaaggccggagtgatggcccagcgaacattacgacatggctcg
gatgtagaagaggccctcacagatgccctgagagcacaaaacaggcggcgttacgagtac
gactctgatgatgctgcaagcgaaacatccagtgtctgctctgagagatcttacaggtca
ataggtcaaacctcagagtcaacaagtaaggattctatatgttcacccccaatggtagaa
agtgcaaatgtcccaaaggatacaacagaaattatcaccttgctgggcagtggttcccat
ggtgacaggaaggaggggctaatagcattacagaaccttctaagaagtggcagattttta
agtcgagtggagttgcagaaagtgtgtgaagtttttaacagaatgttccacgatccacac
agcaaagttttaagtttatttttagacactttagttgatttggttcaagttcacagccag
gacttgaccaatcagatgttcccttttttaactcgcctgctgaataagtcgggacaagat
atgnctggctcggttcagaatcgggtacagagggcactagatgccgttcgggtacatttt
ccagcagaacaccaatttaatgctttgtctaagtacattgtggatcaaactcaatcagct
agccttaagccaaaggtgaaggcttcgctgttgaattacatgcataatctggtgctgatg
atgaacgacacggactttgtcaattctngcgacactcgcctggttctctcccgcatcatc
aacttcaccacagaacccaaaagtgtggaggtccgaaaggctgcccagttagtccttatt
gatctttttaacctgaatgcccctgagctgtccatgatgttgacaaatctgcctaagcca
ttccaagacagtgccaccaagatattgcagacacacatgaggagtgctagcagggacagc
gatgttttgtctcccaaaaacgtcacccctcagcagaaccggagtcgccccccatcaagg
ggtcaccatgatgagatggagaccgaaaacatgaatcccgaggacatctacaactccatc
aagcagacgacggcagacatccagaacctgagcttccacagtaagctggagagctacgac
ccagtcaaaaagaagcgggaattcacctcccaggacagcggaatccaggatctccgcaac
gacagtcctgacgcagtagattctaggaaaggcaactacaacccctcacaatactctgat
gaggctatgaatggtttgaacaaccggtctcgtttggcagatgcagagttagatgatagc
gaattattcaacgaggaaatgataaactcagtagttcttccagatccctggaaagccata
ttaggattctcatgctctgagcatgatgagtctacagacagtgatgtcatcaccaccatt
ttaacagaattgtccaatcacaacaaaaggaataatgaacgaaaggatgccatgctatcc
ttgatcaaaatgacgagagaaggcaatttcaacttctgggatgagcactttaaaaccatt
ctatttgttttattggaaaccctgggtgacacaaatggccatatcagggcattagcatta
cgggtacttagagaaattcttaagaatcaacctagtcgatttaaagattacacggagctg
accattctgcggattctggaggctcacaaggattcagagcgcgaggtggtgcgatccgcg
gaggaatgtgccgataccctggctaattacttgccccccgaaacttgtgtccgcatccta
aaccccatcatcagcactgctctctatcctgtcaatttggcagccattaaaatgcaaaat
aaggtgttagagctattgcccaaagacacattagaagcacaaatgggggaaatcattcct
ggtttactaaggggttacgatgaccagcagagcacagtccgaaagtcggcggtcttctgt
ctggtagccatctatctcaaagtcggggaggggatctggaatcacctcaccaaactcaac
tatagtaaagtaaaactactgaattgtacatcaagcgagcccagcagtccagcggtggta
cgtcagcatcttccctag
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