Crassostrea virginica (eastern oyster): 111136820
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Entry
111136820 CDS
T09197
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111136820
Enzymes [BR:
cvn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
111136820
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111136820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
111136820
NCBI-ProteinID:
XP_022343652
UniProt:
A0A8B8EUP6
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All DBs
Position
5:complement(4147378..4160678)
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AA seq
705 aa
AA seq
DB search
MGRKRDLTQTIKSGPGKKSKKQPPPTFPGLFNEEDTEAKKLSSRQKKRLKKRETKKQEVL
LRKKEKEENYLKLKAKKKTPEVEPNKSRKDNPTKSNRKRKISKAESSSSEEEEDDSDFGG
EEDEVSEEEENESSGEEDLQGYTDDNKLWLKPSKRKKDDNEEDSESEEEDDENDSDDDMA
DDFDSDEEEDDSNEEDEDSNEEMLPIEKAAKKLNKKQEKDRKLAEAELQTNISEMEKYTL
PSGQEIEKESQQTPDLQLIQQRIKEVQHVLGDFKGRREPDRTRQEYLDQLIRDLCAYYSY
NEFLMEKLLQLFPHEISEFLEANEVQRPVTIRTNTLKTRRRDLAQALINRGVNLDPIGKW
SKVGLLVYDSQVPLGATPEYLAGHYIIQGGSSFLPVMALAPQENERVLDMSSAPGGKTTH
IAALMKNTGVIFANDANKDRAKAIVGNVHRMGITNTVICNYDGRKFPSVMHGFDRVLLDA
PCSGTGVIAKDTEVKINKDEKDIQRCSHLQRELLLAAIDCCDAKSSSGGFIVYSTCSILV
DENEAVIEYALNKRNVKLVPTGLDFGKEGYVNFEKHRFHPNMKLTRRFYPHTHNLDGFFV
AKLKKFSNKIPGQEEKARVATEMAESINISEEKPEGSVKNENNSDGEPVKDNEEESPVKK
ENQKKGKSKWSKKDSIKKTFKPGKFKKFKTGDGKAHQKKKPNSKK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaaaagagatttaacccaaaccataaagtctggaccaggcaaaaagtcaaag
aagcaaccacctcctacgtttccagggttgtttaatgaagaagacacagaagcaaagaaa
cttagcagtagacaaaagaaaaggttgaagaaacgggaaacaaaaaaacaagaagtcctt
ttaaggaaaaaggagaaagaggaaaattatctaaaactgaaggctaagaaaaagacacca
gaggtagagccaaataaatcaaggaaagataacccaaccaaaagcaacagaaagaggaag
atctcaaaggcagaatcatcatcatcagaggaggaggaagatgactctgattttggaggt
gaagaggatgaagtcagtgaagaagaggaaaatgaatcatctggtgaagaggaccttcaa
ggctacactgatgacaataaactttggctgaagccctccaaaagaaaaaaggatgacaat
gaagaagatagtgaatctgaagaagaagatgatgaaaatgatagtgacgatgacatggcc
gatgattttgacagtgatgaggaagaggacgatagcaatgaggaagacgaagatagcaat
gaggagatgttacctatcgaaaaggctgctaagaaattaaataagaaacaagaaaaagat
agaaaacttgctgaggcagagttgcagaccaacatatccgaaatggagaaatacacactg
cccagtggacaagaaatcgaaaaagaaagccaacaaacgccagacttacagctaatacaa
cagcgtattaaggaagttcagcatgtgttgggggacttcaaaggtcgccgagaaccagac
agaacccggcaggagtatctggatcagctgatcagagacttgtgtgcctactacagttat
aacgagttcctcatggagaaactgcttcagcttttccctcatgagatatcagagtttcta
gaagctaatgaagtacaaagacctgttaccattcgcacaaataccttgaaaactcgaaga
agggatttagcccaggctttaatcaatagaggggtgaatttggatcccattggtaaatgg
tcaaaggttggacttctcgtttacgactcacaggtcccccttggtgccacacctgaatac
ctggcaggtcattacatcatacagggcggatccagcttcttacctgtcatggctctggcc
ccacaggaaaatgagagagtgttagacatgtcctcagctccaggaggaaaaacaactcat
attgctgctcttatgaagaatacaggagtcatctttgcaaacgatgcaaataaagaccga
gctaaagccatcgttggtaatgtgcacagaatgggaatcaccaacacagtcatatgtaat
tatgatggaaggaaatttccctcggtgatgcatggctttgatcgagtactgttagatgct
ccatgcagtgggacaggggtcattgccaaggacactgaggtcaaaatcaataaggatgag
aaggacatccagagatgttcccacctgcagagggagctgctgctggcagccattgactgc
tgtgatgccaagtccagctcgggaggcttcattgtgtactccacatgctccatccttgtg
gatgaaaatgaagctgtgattgaatacgcgctaaacaagagaaatgttaagctggtgcct
acaggactagactttggaaaagagggatatgtgaattttgagaaacaccgatttcacccc
aacatgaaactgacaagacgattctacccacacactcacaacctggatggtttttttgtg
gcaaagctgaaaaaattttccaacaagattccaggccaagaagaaaaagccagagtagcc
acggagatggcagagtctattaacatttctgaggaaaaacctgaaggatctgtgaaaaat
gaaaacaatagtgatggagaaccagtcaaagacaatgaggaagaatcaccagttaaaaaa
gagaaccagaaaaaggggaaaagtaaatggagtaaaaaggacagcatcaagaagacattc
aaaccaggaaaatttaaaaaattcaaaaccggagatggaaaggcacatcagaaaaagaaa
ccaaattctaagaaatga
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