Crassostrea virginica (eastern oyster): 111136943
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Entry
111136943 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 8-like
KO
K10154
interferon regulatory factor 6
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111136943
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111136943
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
111136943
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111136943
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
MH2
CX9C
Motif
Other DBs
NCBI-GeneID:
111136943
NCBI-ProteinID:
XP_022343833
UniProt:
A0A8B8EW22
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Position
5:complement(29204367..29214404)
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AA seq
487 aa
AA seq
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MAKEFNFRRILEVTMESGHSRQRMRPWLESKVEAGNIQGLAWIDRDKRIFKVPWKHGGKH
DWNEADSTIFKEWAIHTGRYREGVDHADWPTWKTRFRCALNKLPDIQEMKDYNQLDGTDP
FRAYKFLSKEELNQTKGNNKEYREVCTLSNSPNPPTSALPDIVPIPAEVKTSPTLPNFPS
DLEDLDLEPIKSDPSLIPNVYSPSEYANTPVNELPVKEEPSDEEMQDLCEEFPLMTTRGP
QMQTPVNFLSEPXLQDPPSKHEMEITLRYCQQQMCNFHVRSPHGCRLFYDPERNDRLIEN
XLRQEMFGPEQLEQLEFPACETSNPGQREHTNKLLTALERGLLLECQEGIIYATRKSRCV
IFISSPSISNGEPIKLERNVKVPVFDFLGYFETMLQQYLRGSSRKPMAHFLVGFGQKLIS
NNTDLSGLLISAQVYHSRAKYRLNQVACASPLSXSIKMSLSDDYDKFLKYVKAETHGHME
ISSEGPV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaatttaattttcgcaggattttggaagtcactatggagagtggacattca
cgacagcgtatgagaccttggctcgagtccaaagtggaggcagggaatatccaaggactg
gcctggatagaccgtgacaaaaggatcttcaaggttccctggaagcatggtggaaagcat
gactggaatgaagcagattcaaccatatttaaggaatgggccatacacactggtcgatac
agagaaggtgtggaccatgccgattggccaacatggaagactcgcttccgatgtgctctg
aataagcttccagatatccaggaaatgaaagactacaatcaactggatggcacagatcca
tttcgtgcatacaagtttcttagtaaagaagaacttaatcaaacgaagggcaacaataag
gaataccgtgaagtttgcactctaagcaattctccaaatccacccacctctgccttacca
gacattgtcccgattcctgcagaagttaaaacttcacccacattgccaaattttccatct
gacttggaggatttggatttggagccaatcaaatcggatcccagccttattccaaatgtg
tattctccttcggagtatgccaatacaccagtaaatgaattgccagttaaagaggaacca
agtgatgaagaaatgcaagacctctgtgaggaatttccattgatgacaactcgtggtcca
caaatgcaaacccccgtaaattttctgtcggaaccanaacttcaagaccctcccagtaag
catgaaatggaaatcactctgagatattgtcaacaacaaatgtgtaatttccacgtgcga
agtcctcatggatgccgacttttctatgaccctgaaaggaacgatagacttattgaaaac
naactcagacaggaaatgtttggaccggaacagttagaacagctagagttccccgcctgt
gaaaccagcaacccaggacagagagaacacacaaacaaactcctgacggccttagaaagg
ggcttgctcttggagtgccaggagggtatcatttatgcaacccgaaaatcgaggtgtgta
atattcatatcttcaccctcaataagcaatggcgaacccattaaactggagcgtaatgtg
aaagtgcctgtttttgatttccttggatactttgaaaccatgctacagcaatatctgcga
ggttcttccagaaaacctatggcccattttctggtgggatttggacaaaaattgatatcc
aacaatacagaccttagtggtttgctgatatctgctcaggtgtaccatagcagggcaaag
tatcggcttaaccaggtggcttgtgcaagtcctttgtcgncttccattaagatgtcattg
tctgatgactatgacaaatttttaaagtatgttaaagcagaaacccatggacatatggaa
atctcttcagaaggtccagtgtga
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