Crassostrea virginica (eastern oyster): 111136966
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Entry
111136966 CDS
T09197
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111136966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111136966
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
111136966
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Motif
Other DBs
NCBI-GeneID:
111136966
NCBI-ProteinID:
XP_022344276
UniProt:
A0A8B8EWC6
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All DBs
Position
1:3855403..3879259
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AA seq
735 aa
AA seq
DB search
MRRSQAPSQRFSIPISSQKSDQQVKPVVKRARYDDQKEEDERTPLSTITNSPMVRNPDAK
AHEDFIKKILSKPFKIPIPNYKGPLVGRVLGIRRQGTRQPLHDPAEEGALILYSPPELSA
HEQLKADLDRQPVHVVVDPVLSKVLRPHQREGVKFMYDCVTGQRIPDNFGCIMADEMGLG
KTLQCITLMWTLLRQSPDCCPLIDKVIVVTPSSLVKNWYNEAQKWLSGRVNCLAIDSGIK
SEIDRQLNQFMQLSGRRNPHPILIISYETFRLHSAVMHKGEVGLVICDEGHRLKNSENQT
YRALNGLRARRRVLLSGTPIQNDLLEYFSLVHFVNGGILGTAQEFKRRFETPILRGRDAD
ASDEDHRKGQEKLQELADVVNRCIIRRTQALLTRYLPVKVEQIVCCRLTQMQSELYQLLV
RSKGFEVEQEEKSSSSTLSFITQLKKLCNHPDLIYDKCLENAPGYEGTLSLFPPNHTTKV
VRPELSGKVLVLDRLLALIKAQTSDKVVLVSNYTQTLDLFQTLCHQRRYLYVRLDGSMTI
KKRAQVVEKFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARCWR
DGQRKQCFIYRLIATGTIEEKIFQRQTHKKALSSCVVDKEEDVQRHFSREMLRDLFKLRE
DTNSDTHDKFKCKRCVNNIQVRAPPEGSDTNSDLSQWYHAADRKGLVDVVLKGAWDQTIS
FTFHHRSHEEQRHTV
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagtcaagctccgagccaaaggttctcaataccaatttcatctcaaaagagc
gaccagcaagtaaaacctgtggtaaagcgggctcgctatgatgatcaaaaagaagaagat
gagagaactcctctctcaacaattaccaattcacccatggtcagaaacccagatgcaaaa
gctcatgaggatttcatcaagaaaatactgtctaaaccatttaagattccaatacctaat
tacaaagggccacttgtgggtagagttcttggaattcgtcgccaaggcacaagacaacca
ttgcatgaccctgcggaggaaggggcattaattctgtactctccacctgagttgtctgcc
catgagcaactgaaggctgacctagacagacaaccagtacatgttgtggtggatccagtt
ttatccaaagttctgaggcctcatcaaagggagggagtcaagtttatgtatgactgtgtc
actggacaaaggattcctgacaactttggctgtatcatggccgatgaaatggggctgggg
aagactctccagtgtataacgctgatgtggacgttgttgagacagagcccagactgttgt
cccctgattgacaaggtcattgtggtcactcccagtagtctggtcaagaactggtacaac
gaggcccaaaagtggctgagtgggcgggtcaactgtctggccatagactccggcatcaag
agtgaaatcgacaggcagctaaatcagttcatgcagctttctggtcgacggaatccccat
cccatcctgattatatcctacgagactttccgcctccatagtgccgtgatgcacaaggga
gaagtggggctagttatctgtgatgagggacatcggctgaagaactcagagaaccagacc
taccgggcactgaatggactgcgggcacggcgccgggttctcctgtcggggacccccata
cagaatgacctgctggagtacttcagtcttgtccacttcgtcaacggagggattctgggt
acagctcaggagtttaagcggcggtttgagactccaatcctgcggggtagggatgctgat
gctagtgacgaggaccaccgcaagggtcaggaaaaattgcaggagttggcagatgttgtg
aacaggtgtattatcaggagaacacaggccctgctgacaagatatttacctgtaaaagtg
gagcaaattgtatgctgtcgccttacacagatgcaatctgagttataccaactcttggtt
cggtccaaaggctttgaagtggaacaggaagaaaagtcctcatccagtactctgtccttt
atcacccagctcaaaaagctctgtaaccaccctgacctaatttatgacaagtgtctggag
aatgccccgggctacgaggggacactcagtctcttccctccaaaccacaccaccaaggtc
gtccgaccagagctctcaggtaaggtgctggtgttggatcgattgctggccctgataaag
gcccagaccagtgacaaagtggtcctggtctctaactacacccagacactggacctgttc
caaaccctctgtcatcagcgcaggtacctatatgtacgacttgatggatccatgacgatc
aagaagagagcccaagtggtagaaaagttcaacaatccctcgtcccctgaattcatcttc
atgctgagcagtaaggccggtgggtgtggcttgaacctgatcggagccaatcgtctggtg
atgtttgacccggactggaacccggccaatgacgagcaggccatggctcgctgctggaga
gacggacagaggaagcagtgcttcatctacagactgatcgcgacaggaacaatagaggag
aagatctttcagcgtcagactcacaagaaggcactgagcagttgtgttgtggataaggag
gaggatgtacagaggcatttcagtcgcgagatgctgagggacctgtttaaactgcgggag
gacactaacagcgacactcatgacaagttcaagtgcaagcgctgcgtgaataacatccag
gtccgggccccaccggaagggagtgacaccaactcggacttatcccagtggtaccacgct
gccgacaggaaaggtctggtggacgttgtcctgaaaggggcctgggaccagactatctcc
ttcaccttccaccaccgctcccacgaggagcagcgccacaccgtctga
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