Crassostrea virginica (eastern oyster): 111137043
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Entry
111137043 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 3 protein-like
KO
K05401
toll-like receptor 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111137043
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111137043
04090 CD molecules [BR:
cvn04090
]
111137043
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111137043
CD molecules [BR:
cvn04090
]
Proteins
111137043
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_6
LRR_NXF1-5
TIR
LRRCT_2
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
111137043
NCBI-ProteinID:
XP_022343979
UniProt:
A0A8B8EVH4
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Position
5:55039028..55042216
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AA seq
904 aa
AA seq
DB search
MKHMQLFVCWFSPSTPFILFSTLMRSFCNRNLIVIDVIVCFSNQDNTHTGEINIKSQTSY
MQRTCSTETTADCSHKRLNRVPENIPTTTERLYLGYNQLEGIKKNDFCDXPNLIELQLQN
NKIVSISPFAFSGTCLPKIQIIRLENNRINFTVAGTFFNLSSFRDVTLTNNNLTDLSSDT
FIGTPVVFLHLGGNDIRNIPTLNNMNYLQILILEGNKISNCTFPSEFMNITHLKRIVLSN
NKIQSLTKDAFLHLKPSSIRILELARNNITKISNESFLLLTSLQSLKLGRNPLTDSELSN
GLSGLLTAPINSLSIPSLRFNGFLPNNSFRVLENMNLSTLDISFNELYNLPSQGFQKLTK
LKSLDLSNCEIRRIDENSFDGLKILNNLLLSNNYIGRIPVKLPKLLMYLYMTGNQVEILN
NNTFANLTSLKRLHLGNNKILTLFKGAFAGLNNLEELKLHGNRINTLPKRLFSPFSNLVT
LTLQQNRLRMIQNSTMTFSSMTSLKYLNLSDNGCSYVPISLFSNLKSLQELYLKGNKLGK
YLLNNAEGKLFSGLRTLKTLDLSSNQIHTFSSLLFSDMRSLQKLNLEDNWTPGLESNIFS
HSKSLQTLDLSSNMISILNEESMKGLDSVNVINFMNNPFACTCDLRWFRRWMVETKTVLL
NVKKYKCYSPPNWKGKSLLSFDETKIECNLVPITVTIGIISGVVLMSTVLLVVVLRYRLY
IIHSWYSMKRFIRRHLFWKNNGYNEIIPMDYDACIVHSQSPEDYEWIKTYFLPDFDVGTE
HDNYHGQYQIYFDERDTLGNTDRLQTMMEVMEKSRKIIIVVSKHLKAFKLSDILIKETIS
LKGKSLSDVIIIVVGDISLAEIPRVLHSMFKFGEHVEWKDKDLYKRVFKEKMDEKLKNMI
FPIE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatatgcaattatttgtttgttggtttagcccatccacccctttcattctgttt
tcgacgttaatgcgatcattttgtaatagaaatctgatcgttatcgatgttatcgtttgc
ttctccaaccaagataacacacatacgggagaaatcaatataaaaagtcagacgtcatat
atgcagaggacttgcagtacagagacaacggccgactgtagccacaaacgacttaacagg
gtcccggagaacatcccaacaacgactgaacgactgtatctgggatataaccagctagag
ggaattaaaaagaatgatttctgtgacncgccaaaccttatcgaattacagctgcaaaac
aacaaaatcgtatccatctcgccatttgcgttttctgggacctgtcttccgaaaattcaa
ataatacgactggaaaataaccgtatcaattttaccgtggccggtacattttttaatctg
tcctcatttcgtgatgtaactttgacgaataataatcttactgatctgagttcggatact
ttcataggaactccagtggtttttctgcatcttggaggtaatgacatccgtaacattcca
actttaaacaatatgaattatcttcagattttgatacttgagggaaacaaaataagcaac
tgcacctttccaagtgagttcatgaacattacccacttaaaaagaattgtacttagcaac
aataaaatccaaagtttgaccaaagatgcgtttttacatttaaaaccaagcagcatacga
atattggagcttgcaaggaacaatattacgaaaatatccaatgagagttttctcttactt
acgtctttacaatcactgaagctcggaagaaatccattaactgacagcgagttgtcgaat
gggttgtctggattgctaacggccccaatcaattctctcagcattcccagtttgcgtttc
aatggattcctaccaaataactctttccgtgttttagagaatatgaatttatcgacactc
gatataagtttcaatgaactttacaatctaccttcccaaggtttccaaaaattaacaaaa
ttgaagtcactagacttgagtaactgcgaaattcgtagaatagatgaaaactcttttgat
ggactcaaaatactgaacaatcttttgctcagcaacaactacattggaagaatacccgta
aaactcccaaagcttttaatgtatttatacatgactggtaatcaagtggaaatcctgaac
aataatacttttgcgaatttgacatctttaaaacgtctacacttgggcaacaataaaatc
ttgactttatttaagggtgcttttgcaggattaaataacctggaggaattaaagttgcat
ggaaatcgcattaacacccttcctaaacgactgttttctcctttctctaatctagtcaca
ctgacgttacaacagaacaggttgaggatgatacagaactccacaatgaccttttcctcc
atgacatcgctgaaatatttgaatctgtccgataatggctgttcctatgtacctatatct
ctcttctctaatctgaaatctctccaggaattatacctaaaggggaataaacttgggaag
tatttgcttaataatgcagaggggaaacttttttccggattgagaacgctcaagaccctt
gatttgtcgagtaatcaaatccacacattttcttctcttttgttcagcgacatgagaagt
cttcaaaagttgaatctagaggacaattggactcctggattagaaagtaacatattttct
cactccaaatctctgcaaacgttggatctgtcaagtaacatgatttctatcttaaacgaa
gaaagtatgaaaggactagattcggtgaacgtaattaatttcatgaataatccttttgca
tgcacatgtgatcttcgctggtttcgaagatggatggtcgaaaccaaaacagtattactg
aatgtgaaaaaatataagtgttactcacctcctaactggaaaggcaagtcattgctctca
tttgacgaaacgaagattgagtgcaacctcgtaccaattacagtcaccatcgggatcatc
tcgggagtggtgttgatgtctacagttcttttggtagttgttttaaggtatcgtttatac
attatacactcctggtattcaatgaaaagattcattcgtcgtcatttattttggaaaaac
aacggttataatgagataattccgatggattatgatgcctgcatcgttcactctcaaagt
cctgaagactatgaatggataaaaacatactttttgcctgacttcgacgttggcacagaa
cacgacaattaccatggtcaatatcagatttatttcgacgagagagacaccttggggaat
actgacagattgcaaacaatgatggaagtaatggagaaaagcagaaaaataattattgtt
gtttcgaaacacctcaaggcgttcaaacttagtgatatattgattaaagaaacgatatca
ttaaaaggaaagtcactcagtgatgtcatcatcattgttgtgggagacatatccttagcg
gagatacctcgagttcttcactctatgttcaagtttggggagcatgttgaatggaaagat
aaagatttatacaaaagagtttttaaagagaaaatggatgaaaaattgaaaaatatgata
ttccctatagagtga
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