Crassostrea virginica (eastern oyster): 111137452
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Entry
111137452 CDS
T09197
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111137452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111137452
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111137452
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
111137452
NCBI-ProteinID:
XP_022344622
UniProt:
A0A8B8EXF5
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Position
5:complement(49189054..49193148)
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AA seq
915 aa
AA seq
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MDAFQDQGFIAAYKNLPEKASTTIRFFDRTEYYTVHGQDAVFVAKEVFKTVAVVKYLGSG
EKKIESVSVSKLNFESLVKELLLIRQYRVEIFKNKPGTKNNEWSLAFKASPGNLTQFEDI
LFGNSDISQSVGVLALKIATENNERMVGIGFADAMTRKLLVAEFADNDQFSNLEALIVQM
GAKECVVGASDLHTGKLRQVLERGNILVTERKKSDFSSKDIVQDLNRLLKCKKGQQVNSS
TLPEMEKKTAMDAVSALIKYLELMSNEDYFGQFSIGSFDFSQYMKLDSAAVQALNLFPNA
SDGNKNQSILGLMDRCKTVQGQRLLAQWIKQPLMDVNRIEERQKVVEFFVNDTELRQLVA
EDHLRRLPDFQRLSRKFQQRKASLQDCYRVYQALDKLPYLMETLEKHGMESCPLIMEIFV
NPTKELLLDFSKFQEMVEETMDLQQVENHEYVIKPGFDEELQSLSEKISELEDKIKGQLN
KVARDLGIEANKVLKLESSAQLGYFFRVTRKEEKALRNNKNYITIDTKNNGVRFHNNAVK
QLNEDYMRAKEEYSEQQKSIVGEIISIAAGYCEAMVMLNELIAQLDVLVSFAVSATSAPI
PFVRPSLLPKGNGKIKLIDARHPCLEMQEDISFIPNDVIFAKDKQMFHIITGPNMGGKST
YIRSAGVIVLMAQIGSYVPCSEAEVTIVDSILARVGAGDNQVKGISTFMAEMLETASILK
SATENSLMIIDELGRGTSTYDGFGLAWAISEHIATKIKGFCLFATHFHELTTLADKVPTV
NNLHVTALTSNDTLTLLYRVKQGPCDQSFGIHVAELAHFPSHVIEFSKKKAAELEDFQSV
ELDSSLQGDDEPAVKKRKVEKEEGVEIIQKFLDSVKKMPVSNMSDQEILTQMKALKQQVL
DKNNAFVKDVLAKSS
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatttcaagaccaaggatttattgctgcgtacaaaaaccttccagagaaagca
agtacaaccataaggttttttgatcgcacagaatattacacagttcacggacaagatgct
gtgttcgtcgccaaagaagtttttaagacagttgcagtggtaaaatatttaggttcaggt
gaaaagaaaatagaatcggtgtctgtaagcaaactgaattttgaatctcttgtcaaggag
ttgttgctgatacgtcaatatagagttgaaatttttaagaacaaaccagggaccaaaaac
aatgaatggtcattagcgttcaaagcgtcgcctggtaaccttacacagtttgaagatatc
ttgtttggaaactctgatatatcccagtctgtgggtgtattggctctcaagattgcgaca
gaaaacaatgagagaatggttggaattggttttgctgatgcaatgacccgcaaactattg
gtcgcagaatttgcagataacgaccaattttccaatttagaggcattaattgtgcagatg
ggagcaaaagaatgcgttgttggagccagtgatttacatactggaaaactgagacaagtc
ctggaaagaggcaatattctcgtcacagagaggaagaagagcgatttcagcagcaaggat
atcgtgcaagatttgaaccgcctactgaagtgcaaaaaggggcaacaggtcaatagctcc
actttgcctgaaatggagaaaaagaccgcaatggatgctgtttcagccttaattaagtac
ttggagctaatgtctaatgaggattactttggacaattcagcatcgggtcatttgacttc
agtcagtatatgaagctagattccgctgcagtccaagcattaaatttgttcccgaacgca
tctgatggaaacaagaaccaaagcatcctgggccttatggatagatgtaaaactgtacag
ggacaaagactattggctcagtggataaagcaacctctaatggatgtcaatcgaatcgag
gaaaggcaaaaagttgttgaattttttgtgaatgacacggagctgagacaactggtggct
gaggatcatttgagaaggttacctgactttcaaagattatcccgcaaatttcaacagaga
aaggcatcacttcaagattgttacagagtgtaccaggctttagataagcttccttactta
atggagacactagaaaaacatggcatggagagttgtccacttattatggaaatctttgtg
aatcccaccaaagaattgttactggatttcagcaaattccaagaaatggtggaagagacc
atggatcttcagcaagtagaaaatcatgagtatgtcattaaacctgggtttgatgaagaa
ctgcagtcccttagtgagaaaattagtgaattggaagacaaaatcaaaggccagctgaac
aaagttgcgagagacttaggaattgaagcaaacaaggttctgaaattggagagcagtgcg
caactaggatacttcttcagagtgacgcgtaaggaagaaaaggcattgagaaacaacaag
aactacataacaatagataccaaaaacaatggagtgcgttttcacaacaatgctgtgaaa
caactaaatgaggattatatgagggccaaggaggaatatagtgagcagcagaagagcatt
gtgggagaaataatttccatagcagcgggttattgtgaagccatggtgatgctgaatgag
ttgatagcacaactggatgtgttggtcagttttgctgtatcagcaacaagtgctcccatt
ccgtttgttcgtccaagtctgttacccaagggcaacggtaaaattaagttgattgatgca
cgccatccctgtttggaaatgcaggaagatatctctttcattcctaatgacgtcatattt
gcaaaagataaacaaatgtttcatatcattactggaccaaatatgggaggaaaatcaaca
tacattcgatcggctggagtgattgttctcatggcacaaattggttcttatgtcccttgt
agtgaagcagaagttaccatagtcgacagcattttggcaagagtgggtgcaggagacaat
caagtgaaaggtatttcaaccttcatggcggagatgttggaaactgcttcaattctgaaa
tcagcaacagaaaactccctgatgatcattgatgaacttggcaggggaacctctacttat
gatggctttggattggcctgggcgatttctgaacacattgcaacgaagattaaaggattt
tgcctctttgccacccatttccacgagctgactactcttgctgataaggtacccactgtg
aataacctccacgtcacagctttgacctccaatgacactttgaccttactatatagggtc
aagcaagggccatgtgaccagagctttgggatccatgttgcagagttggcccacttccca
tctcatgtgattgagttttcaaagaaaaaagcagcagaacttgaagacttccagtccgtg
gaattagattcttccttgcaaggggatgatgaaccagcagtgaaaaaaagaaaggttgaa
aaagaggaaggggtggagattatccaaaaattcctggacagtgttaaaaagatgccagtc
tccaacatgtcagaccaagagattctcacccaaatgaaagctctgaaacagcaagtcctt
gataagaataatgcttttgtgaaagatgtattggctaagagtagttga
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