Crassostrea virginica (eastern oyster): 111137659
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Entry
111137659 CDS
T09197
Name
(RefSeq) FACT complex subunit SSRP1-like isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111137659
03036 Chromosome and associated proteins [BR:
cvn03036
]
111137659
Transcription factors [BR:
cvn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
111137659
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
111137659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
111137659
NCBI-ProteinID:
XP_022344930
UniProt:
A0A8B8EY20
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Position
5:complement(10218433..10235843)
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AA seq
770 aa
AA seq
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MTKCVGNMSDFQEYPDVVQEVRGALNPGRLKLQSNSVIFKNNKTGKIDQYPGTDVDKVHW
LKRARGNCLKFLLSSGTIHRYDGFKEGEFEKLAAFISKYYMVSLEKKDLSVKGWNWGLAN
FTGNALEFEVDNKLGFEVPLSHVSHTTTAKQEVTLEFHPNDDAAVSLMELRFHIPPDPKD
TEKDLVQEFYNNVLEKADIIQATGDALAVFTEVQCLTPRGRYDFKMYNTFLQLHGKTFDY
KIPYTTVLRLFLLPHKDGRQMFFVISLDPPIKQGQTRYHFCILLFNIDDEMSIELGLSDE
DLNEKYENKLQKEMSGPEYEVISRVFKAVTNRKITVPGSFLSNTKSHSISCSYKAATGFL
YPLERGFIFVHKPPIHIRFDEVVTVNFARSAGTNRSFDFDVETKSGTTYTFVGIEKDEYG
KLYDFVSSKKLRVKNINGKGDKAPYRDDMSGSDDEDDHDAYLERMKAEGKDRQSGDEDDD
SDSSDESYNPNESASDVAEEYDSNPPTTSSNSDDSEGSGGDSGDEEAKEQKRKERQERKS
KEKKKSHTAKTVREKLPGSEKKKKKKSKKDPNAPKRPQSAYFLWFNANREELKKDNPDIS
ITDLSKKAGELWKQLEDKTEWNEKAAEAKKDYEKAMKEYQAKRAEASDEEGEEESAKKRK
SPKKSPSKSASDSRAGAGTNYKSKEYISSSGSNSSGSDSDDKPLKKKAKKDDSKKEKKKK
KEKEPETKRKSKRQNKGSESESSVGELPDEEEILDTPPSSGKSASESESD
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatgtgtcggtaacatgagtgatttccaggagtatcctgatgtggtgcaggag
gtcaggggagccttgaatcctggtagattaaaactccagagtaacagtgtcatctttaaa
aacaacaaaactggtaaaattgaccaatatccaggcacagatgtagacaaggttcattgg
ttaaagcgtgcaagaggaaactgcctgaaatttctcttgtcaagcggaaccattcacaga
tatgatggattcaaagaaggggaatttgagaaacttgcagcttttatttccaagtactac
atggtgagtttagagaagaaagacttgtcagtgaaaggatggaactggggattagcaaat
tttacaggaaatgctctggagtttgaagtggacaacaagctaggctttgaggttcccctc
agccatgtttctcacaccacaactgccaaacaggaagtaacactcgagttccaccccaac
gatgacgcagctgtctcactgatggagctcaggttccacatccctcccgacccaaaagac
accgaaaaagaccttgtgcaagagttttacaacaatgttctggagaaagcagatattatt
caggccactggggatgcccttgctgtttttacagaggtccaatgtcttactcccagaggt
cgctatgatttcaaaatgtacaacacatttctacaacttcatggtaagacctttgactac
aagattccctacactacagtgctacgattgtttctgctgccccacaaggatggaagacag
atgttctttgtgatcagtttggatcctcccattaaacaggggcagacacgttaccatttc
tgtattcttttgtttaacattgatgatgaaatgtctattgagcttggattgtcagacgaa
gaccttaatgagaagtatgaaaataaacttcagaaggagatgtctggaccagaatacgag
gtgatcagccgagtgtttaaagctgtcaccaaccgcaaaattacagtgccaggctctttc
ctcagcaacacaaaatcccactccatcagctgttcgtataaagcagccacaggtttcctc
tatcccctggagaggggattcatcttcgtccacaaacctccaattcacatccgctttgat
gaagtggtaactgtgaactttgcgcgcagtgctggaacaaacagatcctttgattttgat
gtggaaacaaaatctgggaccacttacacttttgttggtattgaaaaagatgaatatgga
aagttgtatgactttgtttcaagtaaaaaactgagagtgaaaaatatcaatggcaaaggg
gataaggctccctacagagacgatatgtcaggttcggatgatgaagacgaccacgatgcc
tacctggagaggatgaaggcagagggcaaggatagacagagtggagacgaagatgatgac
agtgatagctcagatgagtcatataatccaaatgaaagtgcaagcgatgttgcagaagag
tatgacagtaatccacccaccacttcctctaattctgacgattccgagggcagtggaggt
gactccggagacgaggaagccaaggaacagaaacggaaagagaggcaggagaggaaatcc
aaggaaaagaagaaatcacacactgctaagactgtgagagaaaaattgcctggttcagag
aagaaaaagaagaagaaatctaagaaagatcctaatgctcccaaaaggccgcagtctgca
tacttcttatggttcaatgcaaaccgagaggagctgaagaaggataacccggacatcagc
atcactgacctctccaagaaggcgggggaactctggaaacagctggaggataaaacggaa
tggaatgagaaagctgctgaggccaagaaagattatgagaaagctatgaaggaataccaa
gccaagcgggcagaggcctcggacgaggagggagaggaggagtcagcaaagaaaaggaag
agtccaaagaagagtccctctaagtcggcctcggacagtcgagcaggtgcaggaactaac
tacaagagtaaggagtatatctccagttcgggaagtaactcttctggttctgacagtgat
gacaaaccactcaaaaagaaagcaaagaaggatgacagcaagaaagagaagaagaagaag
aaggagaaagaaccagagactaagaggaagtccaaacgacaaaacaaaggcagtgaaagt
gaaagtagtgtgggggagctcccagacgaggaagaaattctggatacacctccatcatca
ggaaagtcagcctccgaatcagagtcagactga
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