Crassostrea virginica (eastern oyster): 111137768
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Entry
111137768 CDS
T09197
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111137768
03036 Chromosome and associated proteins [BR:
cvn03036
]
111137768
Transcription factors [BR:
cvn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
111137768
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
111137768
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GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
111137768
NCBI-ProteinID:
XP_022345117
UniProt:
A0A8B8EYV8
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Position
5:10374849..10384368
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AA seq
762 aa
AA seq
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MSDFQEYPDVVQEVRGALNPGRLKLQSNSVIFKNNKTGKIDQYPGTDVDKVHWLKRARGN
CLKFLLSSGTIHRYDGFKEGEFEKLAAFISKYYMVSLEKKDLSVKGWNWGLANFTGNALE
FEVDNKLGFEVPLSHVSHTTTAKQEVTLEFHPNDDAAVSLMELRFHIPPDPKDTEKDLVQ
EFYNNVLEKADIIQATGDALAVFTEVQCLTPRGRYDFKMYNTFLQLHGKTFDYKIPYTTV
LRLFLLPHKDGRQMFFVISLDPPIKQGQTRYHFCILLFNIDDEMSIELGLSDEDLNEKYE
NKLQKEMSGPEYEVISRVFKAVTNRKITVPGSFLSNTKSHSISCSYKAATGFLYPLERGF
IFVHKPPIHIRFDEVVTVNFARSAGTNRSFDFDVETKSGTTYTFVGIEKDEYGKLYDFVS
SKKLRVKNINGKGDKAPYRDDMSGSDDEDDHDAYLERMKAEGKDRQSGDEDDDSDSSDES
YNPNESASDVAEEYDSNPPTTSSNSDDSEGSGGDSGDDEAKEQKRKERQERKSKEKKKSH
TAKTVREKLPGSEKKKKKKSKKDPNAPKRPQSAYFLWFNANREELKKDNPDISITDLSKK
AGELWKQLEDKTEWNEKAAEAKKDYEKAMKEYQAKRAEASDEEGEEESAKKRKSPKKSPS
KSASDSRAGAGTNYKSKEYISSSGSNSSGSDSDDKPLKKKAKKDDSKKEKKKKEKEPETK
RKSKRQNKGSESESSVGELPDEEEILDTPPSSGKSASESESD
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttccaggagtatcctgatgtggtgcaggaggtcaggggagccttgaatcct
ggtagattaaaactccagagtaacagtgtcatctttaaaaacaacaaaactggtaaaatt
gaccaatatccaggcacagatgtagacaaggttcattggttaaagcgtgcaagaggaaac
tgcctgaaatttctcttgtcaagcggaaccattcacagatatgatggattcaaagaaggg
gaatttgagaaacttgcagcttttatttccaagtactacatggtgagtttagagaagaaa
gacttgtcagtgaaaggatggaactggggattagcaaattttacaggaaatgctctggag
tttgaagtggacaacaagctaggctttgaggttcccctcagccatgtttctcacaccaca
actgccaaacaggaagtaacactcgagttccaccccaacgatgacgcagctgtctcactg
atggagctcaggttccacatccctcccgacccaaaagacaccgaaaaagaccttgtgcaa
gagttttacaacaatgttctggagaaagcagatattattcaggccactggggatgccctt
gctgtttttacagaggtccaatgtcttactcccagaggtcgctatgatttcaaaatgtac
aacacatttctacaacttcatggtaagacctttgactacaagattccctacactacagtg
ctacgattgtttctgctgccccacaaggatggaagacagatgttctttgtgatcagtttg
gatcctcccattaaacaggggcagacacgttaccatttctgtattcttttgtttaacatt
gatgatgaaatgtctattgagcttggattgtcagacgaagaccttaatgagaagtatgaa
aataaacttcagaaggagatgtctggaccagaatacgaggtgatcagccgagtgtttaaa
gctgtcaccaaccgcaaaattacagtgccaggctctttcctcagcaacacaaaatcccac
tccatcagctgttcgtataaggcagccacaggtttcctctatcccctggagaggggattc
atcttcgtccacaaacctccaattcacatccgctttgatgaagtggtaactgtgaacttt
gcgcgcagtgctggaacaaacagatcctttgattttgatgtggaaacaaaatctgggacc
acatacacttttgttggtattgaaaaagatgaatacggaaagttgtatgactttgtttca
agtaaaaaactgagagtgaaaaatatcaatggcaaaggggataaggctccctacagagac
gacatgtcaggttcggatgatgaagacgaccatgatgcctacctggagaggatgaaagca
gagggcaaggatagacagagtggagacgaagatgatgacagtgatagctcagatgagtca
tataatccaaatgaaagtgcaagcgatgttgcagaagagtatgacagtaatccacccacc
acttcctctaattctgacgattctgagggcagtggaggagactctggagatgacgaagcc
aaggaacagaaacggaaagagaggcaggagaggaagtccaaggaaaagaagaaatcacac
acggccaagactgtgagagaaaaattgcctggttcagagaagaaaaagaagaagaaatct
aagaaagatcctaatgctcccaaaaggccgcagtctgcatacttcttatggttcaatgca
aaccgagaggagctgaagaaggataacccggacatcagcatcactgacctctccaagaag
gcgggggaactctggaaacagctggaggataaaacggaatggaatgagaaagctgctgag
gccaagaaagattatgagaaagctatgaaggaataccaagccaagcgggcagaggcctcg
gacgaggagggagaggaggagtcagcaaagaaaaggaagagtccaaagaagagtccctct
aagtcggcctcggacagtcgagcaggtgccggaactaactacaagagtaaggagtatatc
tccagttcgggaagtaactcttctggttctgacagtgatgacaaaccactcaaaaagaaa
gcaaagaaggatgacagcaagaaagagaagaagaagaaggagaaagaaccagagactaag
aggaagtccaaacgacaaaacaaaggcagtgaaagtgaaagtagtgtgggggagctccca
gacgaggaagaaattctggatacacctccatcatcaggaaagtcagcctccgaatcagag
tcagactga
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