Crassostrea virginica (eastern oyster): 111138009
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Entry
111138009 CDS
T09197
Name
(RefSeq) zinc finger protein 423-like
KO
K22870
zinc finger protein 423
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111138009
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111138009
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111138009
Cilium and associated proteins [BR:
cvn03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
111138009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-H2C2_2
zf-C2H2_6
zf-C2H2_jaz
zf-Di19
zf-C2H2_3rep
zf-met
zf-C2HE
Rad50_zn_hook
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
111138009
NCBI-ProteinID:
XP_022345463
EnsemblRapid:
LOC111138009
UniProt:
A0A8B8F0Z9
LinkDB
All DBs
Position
5:5409280..5429092
Genome browser
AA seq
1502 aa
AA seq
DB search
MSRRKQARPRLCKRDDDDNGDVFTNCTEDAVGLGAKLKDTATPSKEPGYGLVADEGQSDL
EMTGPVAKIAKFDSDEASDLRCDTCGAIFSNLTQFMDHRNFECSPGQESQPQWTIENLAL
NIGHTDSVSSGESGDEVPGLELPLSPGLENLTPEDVPGVVGVSQTNPYGCHFCDKAFPRL
SFLKIHEQIHSDQLPFKCTICSRRFRHKRSRDRHVKLHTGEKKYKCRQCQAAFVRSDHLK
SHMKTHDSSKVSFQCEICQQTFTSVDVMMSHMTTHDQLTDTKKSMNLKCIYCPQEFDNLS
DFKFHLMSHEKVHNQNFLCSLCGSVFPSQDDLDNHVEKVHLDETRNKCPLCSEVFGNLYD
LYAHMSSHENDIKDSGTCQVNALTGPPVHGELLVCPYCFCSDFDTLEVLEIHMQSVHSVK
PAEVYTCNYCNAPYKNLYSLHEHMRAVHQNQPCLDIKYPCSLCSRQFGSIETLIQHKRAL
HPNEHRKSKAELLKHAMLDHRRAEQDKQKKFHAQANLKIPTPRKSSFTKPSFRGSEQSKE
EIICEQCNARFYDFLHFQNHMKLHMETKSPLKLQEALSSPGLSAGLSPVSVSSSLSPGMS
GVPCKHCSLQFPNEELLEKHIVSHYLNISTEYGCTTCVKLFSKPDELQKHLMDIHAHHLF
RCALCKEIFDSKVNIQVHFAIKHSNECKLYRCTKCDSVFRSEVEWGVHVRVNHLQIAKPY
RCLFCKDSFSSEMELQCHLTTHSRPFKCSMCTESFHVEYLLDKHVQSVHATEEGTGRQTP
SHRVSDRATPKLQHPPIVKVKVEKDLLEMSFGGNKEPNTEAGNFFSPRASPGIWKSSDLT
FTCNICDMKFSHHPALLSHKAHDHGLSAILKAVGAEHHSDTKQQASLDNYQDEEKDPSPE
PPVSKDKASVSTAETPPPKSLSVFMSPERVTVSCLYCSQTFKNRTEMDKHMKIHLNNGDE
KCNICDRVFSTPSILAEHKLTHCKIKEGNVCVLCKVALKSEEQFYIHTQEHGFQSTYIQC
LICRQTLVSMVELQMHGKHHFQSTNSSFTCCVCLEAFKSKENLVSKINASGRNYFVCKMC
YHGSKSLYHCEACGDSFLNPLQLEAHVFTHHGGKQEHTCQKCQATFQSSLLLKAHNLSHH
SPEPSPASFSSHSQLEPHPQTHKKSYTCIKCQESFDSEEDIQQHVASHVRKEGNIHECKL
CSLSFTSPAKLQCHLIEHTFPASEFRCSVCCRLFTNAADLQQHAVEHGLGARRYSCSKCS
QKFFFSAELENHQLCDHDGLTDNTKAKKKSLMNGKEFRIKQENLHIEKSSHNTKQNGSSQ
ELQCPVCAQMFPKVSEMIGHIQEHFEVITNGKFESIHNAGPLCCPVCRSSSSNLTELKDH
LKTEHSENKLSCNICKKSFSHPKTLKLHVRLHNSSKGYECPVCHKRFTRKENRKAHMKTH
KGIKPTLYQCLTDTSQKSMENLNGGNPKADSFSKAELLAVNGGTPKAEPFSKTELLGVNG
AE
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaagaaagcaagctcgacctcgcctatgtaaaagagatgatgatgataatgga
gatgtcttcacgaattgtacagaggatgctgtgggacttggggctaagcttaaggacact
gccactcccagcaaagaaccgggatatggcttggtggccgatgaaggtcagtctgaccta
gaaatgacaggtcctgttgcaaaaattgccaaattcgactcagacgaagcctcagatctg
cgatgtgacacgtgtggtgctatcttttctaacttgacgcagttcatggatcaccgcaat
tttgaatgctctcctgggcaggagagccagccccagtggacaattgaaaacttagccctg
aacataggacacactgattccgtatcttcaggtgaatcaggggatgaggtgccaggattg
gagcttcccctgtcccccgggctggagaatttgacccctgaggacgttcctggagtagtt
ggggtttctcagactaacccctatggctgccatttttgtgacaaagccttcccgaggctc
agctttctgaaaattcacgagcagattcacagtgaccagttgccattcaaatgtaccata
tgcagtaggcgattccggcacaaacgaagccgggacaggcatgtcaaactccacacgggg
gaaaagaaatacaaatgtcggcagtgtcaggcggcctttgtcagaagtgatcatctgaag
agccatatgaaaacccacgattcctccaaagtcagttttcagtgtgaaatttgtcagcag
accttcactagtgttgatgttatgatgagccatatgacaacacatgatcaactgacagac
acaaagaaaagcatgaatttaaaatgtatttattgcccacaggagtttgataacctgtct
gacttcaaattccatctaatgagccatgaaaaggttcacaaccagaatttcctctgttct
ctttgtggtagtgtgtttccttcacaagatgacctagataatcatgtggaaaaggtgcac
ctggatgaaaccaggaataaatgcccgctttgttcagaagtgtttgggaatctctatgat
ttgtatgcacatatgagttctcatgaaaatgatatcaaagattcaggaacatgtcaggta
aatgcactgacagggcctcctgtccatggagagctccttgtctgcccttactgcttctgt
agtgactttgatacactggaagtcctagaaatccacatgcagagtgtacattctgtcaaa
ccagctgaagtctacacatgtaactactgcaatgctccatataaaaatttgtatagtctg
catgaacacatgagagctgtgcaccaaaaccaaccttgtttagacattaaatatccttgt
tctctgtgctcgaggcagtttggaagcattgagacactaattcagcacaaaagagctttg
catcctaatgagcatcgaaaatcaaaggctgaattactgaaacatgccatgctggatcat
cgtagagcagagcaagacaagcaaaagaaattccacgcacaagcaaatctgaaaattccc
actccgaggaagtccagttttacaaagcccagcttcagaggatctgaacagagcaaggag
gagataatctgtgaacagtgtaatgctcgcttttatgactttcttcatttccagaaccac
atgaagctacacatggagacaaaatcccctcttaagctccaggaggccctatcctcccca
ggcctgtctgctggattgtcacctgtgtctgtgtcatcgtccttatcacctggcatgtca
ggtgtgccatgtaagcattgcagtctgcagtttccaaatgaagaactgctggagaagcat
attgtttctcactatctcaacatttccacggagtatggttgtacaacatgtgtcaaactt
ttctccaaacctgatgagctccagaagcacctgatggatattcatgcccatcatttgttc
aggtgtgctttgtgtaaggagatctttgattccaaggtgaacatacaggttcactttgcc
attaaacacagcaatgaatgtaagctgtacaggtgtaccaagtgtgactcggtttttagg
tctgaggtggagtggggcgtacatgtgcgagtcaaccaccttcagattgcaaagccatac
aggtgcctgttttgtaaggacagtttctcgtctgagatggagcttcagtgtcacctgacc
acacacagtcggccattcaagtgttccatgtgtaccgagtccttccatgtggagtacttg
ttggataaacatgtacagagtgttcacgcaacagaggagggaacaggcagacaaactccc
tcccaccgagtgtcagaccgagccacacccaagttacaacacccacccattgtcaaggtc
aaggttgaaaaagatcttcttgagatgagttttggtggaaacaaggagcctaatactgag
gcggggaacttcttttccccacgagctagcccaggaatatggaaatcctcagacctgacc
ttcacgtgtaacatctgtgacatgaagttttcccatcatcctgctttgctgagtcacaaa
gcacatgatcatggtctctccgccattctcaaagcagtgggtgcagaacaccactcagac
actaaacaacaggcttcactggacaattatcaagacgaagagaaagaccccagtccagaa
cctcctgtcagtaaagacaaggcgtcagtgtccacagcggaaaccccgccccctaaatcc
ctgtctgtcttcatgtcaccagagcgagtcactgtgtcctgtttgtactgtagccagaca
tttaagaatcgcacagaaatggacaaacacatgaagatacacctcaacaatggagatgag
aaatgcaatatttgtgacagagtgttttccactccaagcatcctagcagaacacaagctg
acccactgcaaaatcaaggagggcaatgtgtgtgtgttatgtaaggtggcactgaaatca
gaggagcagttttacatccatacccaagagcatgggtttcagagcacatacatacagtgt
ctgatatgtcggcaaactctggtgtcaatggttgagctccagatgcatggcaaacatcat
ttccagtccaccaatagttcattcacctgttgtgtttgtcttgaagcattcaagtccaaa
gaaaacttggtctctaaaatcaatgccagtggccgtaactactttgtctgcaagatgtgc
taccatggcagtaagtctctgtatcactgtgaggcttgtggtgacagttttctgaacccc
ctgcagctggaggcccatgtattcacgcaccatggagggaagcaggagcacacttgtcag
aagtgtcaggccaccttccagtccagtctcctgttaaaggcccacaatctgtctcatcat
tccccagaaccctccccagcctcgttctcatcacactctcaactggagccccatccacaa
acacacaaaaagtcctacacctgcatcaagtgtcaggagtcttttgattcagaggaagac
attcagcaacatgtggcttcccatgtcaggaaagagggcaatattcatgaatgtaaactt
tgctctttgagtttcacttctcctgcaaaacttcagtgtcatctcatagaacacactttt
ccagcatcagaattccgatgcagcgtatgctgtcggttgttcaccaatgcagcagacctt
cagcagcatgctgtggagcatgggctaggtgctaggaggtattcctgttcaaaatgcagt
cagaaatttttcttcagtgcagaattagagaaccaccaactttgtgaccatgatggacta
acagacaataccaaagcgaagaaaaaatcacttatgaatgggaaagaattcagaataaaa
caagaaaatttacatattgaaaaatcttcacacaacacaaaacaaaatggcagttcacaa
gaactccagtgtccagtttgtgcacaaatgtttcccaaagtatcagagatgattggtcac
attcaagaacactttgaagtaattaccaatgggaagtttgagtccatccacaatgctggg
ccattgtgttgtccagtctgtaggagttcatcttctaatctgacggagctgaaagaccac
ctaaaaacagaacattcagagaacaaattgagttgcaatatctgcaagaagtcttttagc
cacccaaagactttaaaactccacgtgcgtttacacaattccagtaaaggctatgaatgt
ccagtctgtcacaaacggtttacaaggaaagaaaaccgtaaagcccacatgaaaacacac
aaaggaatcaaaccgacgttatatcagtgtctgactgatacaagtcagaaatctatggag
aacttgaatggcggaaatccaaaggcagactcgttctccaaggcggagttgttggctgtg
aatggcggaactccaaaggcggaaccgttctccaagacggagttgttgggtgtgaatggt
gctgaatag
DBGET
integrated database retrieval system