Crassostrea virginica (eastern oyster): 111138079
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Entry
111138079 CDS
T09197
Name
(RefSeq) F-box only protein 39-like
KO
K10314
F-box protein 39
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111138079
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111138079
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
111138079
NCBI-ProteinID:
XP_022345590
UniProt:
A0A8B8EZU6
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Position
5:complement(39818960..39821914)
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AA seq
481 aa
AA seq
DB search
MKTKLQCNVTTVSNVITKQSSNVIVCQASWKRMGLDWWLQQASRFWSAFIASKTNMEQFK
WEHLPDVVIIEVYKYLSDEEKVNAALTCKNWGRMYYTPCLWRKRHFDIGGYRVHANGLKA
CQFASLHGRHVRNLSLSCSHPSYHTAKLFQKTMEELLFKMRHAKLIEFELERLELERFLR
YEASRDRLISNFVRFFRYQNHLQEFDMTSAQFPAVAGIRILETIGNNCGHTTKEMFLEDF
FNSRAAIFQVPRYLNTLSLFKNLEFLALNYNCVSEEIILLFAKNLRGKLEMLSIKVGRHD
PRFQRISGSAWTTLKRACPKLVVTLWFENIGNMHEIVPILSKEIPLRDFHIWTGYDDDAD
WRLNDTLRHLHTSYKHIIESVSLELDNNHETVDEEILLMVTSCKFLRDLTINAVVLIPTI
QQIMELQHERKINLRTFRVTACGLSENEWTQLAEIRDNYTTMIQERALDFRFTTDLIVDF
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaaattgcaatgtaacgtcacaacggtcagcaacgtcataacaaaacaatcc
agtaacgtcatagtgtgccaagcatcatggaaacgcatgggcttggattggtggctgcaa
caagctagcagattttggtcagcattcatcgcctctaaaacaaatatggagcagtttaag
tgggaacatcttccagatgtggtgataatcgaggtgtataaatacctttcggatgaagag
aaagtcaacgcggcgctgacttgcaagaactggggaagaatgtactacactccttgtctg
tggcgaaaaagacattttgatatcggcgggtacagagtccatgccaacggactaaaggcg
tgccagtttgcaagtctacatggtagacatgtgagaaacttatctctttcgtgtagtcat
ccgtcataccacacagcaaaactttttcaaaaaacaatggaagaattgctattcaaaatg
cggcacgccaaactgatcgaatttgaattggagagactagagttggaacggtttttgaga
tatgaagcatcaagggatcgtctgatatcaaattttgttagattctttcgatatcaaaat
catttacaagaatttgatatgacatcggcgcaatttccagcagtagctggaatccgtata
ttggaaacaatagggaataattgtgggcacaccacaaaagaaatgttcttggaagacttt
ttcaactctcgcgcggcaatttttcaagtacctagatatctcaatactttatcacttttc
aaaaacctagaattcttggccttaaattataattgcgtatcggaagagattattcttttg
tttgccaaaaatttacgcggaaaattggaaatgttgagtatcaaagtgggcagacacgac
ccaagatttcagagaattagtggaagcgcgtggacaacgcttaaaagagcatgtccaaaa
ctggtagtcactctttggtttgaaaacattgggaacatgcatgagatcgttccgattctc
tcgaaagaaattccactacgcgatttccatatttggacaggttacgatgatgatgcagat
tggaggctgaacgacaccttgcgtcatcttcatacgtcgtataaacatatcatagaatct
gtgtccttggagctggacaataatcatgaaacggttgatgaggagatcctactgatggtg
acgtcttgcaagtttctgagggacctcaccattaacgctgtcgttttgattcctaccatt
caacagattatggagttacagcatgaacgcaaaatcaatctaagaacattccgggtcaca
gcttgtggtttgtccgagaatgagtggacacagctggctgaaatccgagacaactacacc
accatgattcaggagagggctctggatttcagattcaccaccgatcttattgttgatttt
tcttga
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