Crassostrea virginica (eastern oyster): 111138126 Help Entry 111138126         CDS       T09197                                  Name (RefSeq) DNA ligase 3-like   KO K10776   DNA ligase 3 [EC:6.5.1.1] Organism cvn  Crassostrea virginica (eastern oyster) Pathway cvn03410   Base excision repair Brite KEGG Orthology (KO) [BR:cvn00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     111138126  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cvn03400]     111138126 Enzymes [BR:cvn01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      111138126 DNA repair and recombination proteins [BR:cvn03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      111138126 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N zf-PARP LIG3_BRCT DNA_ligase_A_C zf-CCHH RNA_ligase BRCT_2 mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  111138126 NCBI-ProteinID:  XP_022345668 EnsemblRapid:  LOC111138126 UniProt:  A0A8B8F1I8 LinkDB All DBs Position 5:60374093..60391288 Genome browser AA seq 995 aa AA seqDB search MRRICRQAYIYTAYQCLQSNSFRTRSAATQITKLQILHVNHLQAPSINSLHNSSFFRIMA ENRYVTGYAKLGTSSCKKCKQKIEKGALRIGKVVSNPFSDEGGDMKQWYHPQCIFETFKR ARATTKKIEEPDDLEGFTEIEQSDKDLINKLIKEFCTHSSTKSPGSAKKKPAAPVQATLP FSPTKQKVDPDDEAGPSTSGTGSDITGHRDDSFREFRRLCAEIAEESSYLAKTKLVHDFI NKGSSGDGFQGDLYLWMKCLLPGVVKQVYNLNSKQLVKLFSQIFGTNQDDMVADLDQGDV AETVRLYFEESKRLPPQKKSTLSLQQVDEYLTELAKLTKEDDQQRVLTKVAKRCTGNDLK MFVRLIKHDLRINSGAKHMLDALDDNAYAAFQASRNLRDVVDRVMENKAGGVPGLKKKLS VKASLMTPVLPMLAEACRSVDYAMKKCPNGFYAEIKYDGERVQLHKKGNQFQYFSRSLKP VLPHKVQHFKEYIPQAFPTGDDLILDAEVLLVDTKTSKPLPFGTLGVHKKAAFKDANVCL FVFDCLHLNGENIMHKPIKERKKILETEMKEIANRVMLSETQFITDPDDLQTLMTKVFKE GLEGLVLKDINSKYEAGKRHWLKIKKDYLEQGTMADSADLVVLGAYFGTGNKGGIMSIFL LGAYNPSSGKWCTVTKCHSGLDDKTLEELQTSLDMVKISKNADKVPDWLNVKKTVVPDFV TRDPKKSPVWEISGAEFSKADIHTADGISIRFPRITKFRDDKTWENATDVPRLRTLFKKS KETSDLIPSTSKGTPKKKSPKDDNVDDNENSNGGNDSGTDINSDDDSYKSPLKTTTPIKG NATPTKTTPLKGTPIKNGVKRKHSDTDEVEITPSKKSKPLCKYGSECYQTNPKHLEQFYH PPKTLPNVFRGCKIFLPPDIKSYRMLRRYIVGWDGELVPEYDKATATHVILPHGHKGDVV KCAGVCLTDDWIKLCIKKKMLMRTDPYIVSNDDDE NT seq 2988 nt NT seq  +upstreamnt  +downstreamnt atgcgaagaatttgccgacaggcttacatttatacagcatatcagtgcctgcagtcaaat tcatttagaactagatcagctgctacccagattacgaaactccagattctacatgtcaat catttgcaagctccttctatcaatagtttgcataactcatctttttttagaataatggca gaaaacagatatgtcacaggctatgccaaactaggaacatcaagttgtaagaagtgtaaa cagaagatagagaaaggggcacttcggatcggaaaggtggtgtccaaccctttctcggat gaagggggtgacatgaaacagtggtaccacccacagtgtatctttgaaacctttaagaga gccagggccaccacgaaaaagattgaagagccagatgatttggaggggttcaccgagatt gagcaatcagacaaagacttgatcaacaagttaatcaaagaattttgcacgcactccagt accaagtccccaggttcggccaagaaaaaaccagctgctccagtccaggcgactctgcca ttctcccccacaaaacaaaaagtagatcctgatgatgaagctggtccctctacaagtggc acaggaagtgacatcacaggacacagggacgactcattccgagagttccgacgcctatgt gcagaaattgcagaagagagttcctacttggcaaagactaaattagttcatgatttcatc aacaaaggttcttctggagatggctttcaaggtgatctgtacctgtggatgaagtgcctt ttacctggagtagtgaagcaggtgtataacctgaacagtaaacagctagtcaaactgttt agtcagatattcggaacaaatcaggatgacatggtagcagatttagatcagggagatgtg gcggagaccgtgagattgtattttgaggaaagcaagcggttgcctccccagaagaaaagc actttgtctctacagcaagttgatgaatacctgactgaattagccaaattaaccaaggaa gatgaccaacaaagggtcctcaccaaagttgctaaaagatgtaccggaaatgatttaaag atgtttgtgaggttgatcaaacacgatctgagaatcaactcgggagcaaaacatatgctg gatgctttggatgataacgcctatgctgccttccaggcctccagaaaccttagagatgtt gttgatcgggtgatggagaacaaagcagggggcgtcccaggattgaagaaaaagctcagc gtcaaggcctctctcatgacccccgtcctacccatgctggcggaggcttgccggtctgtt gattatgctatgaagaagtgccccaatggtttctatgctgaaattaagtatgatggagag agggtgcaacttcataaaaaaggaaatcagtttcagtattttagtagaagtcttaaacca gttctacctcataaagtgcagcattttaaggagtacattccacaggcattccccactggt gatgatctcattttagatgctgaagtcttattggtggacactaaaaccagtaaaccactt ccatttggaacactgggtgttcataagaaagctgctttcaaggatgctaatgtctgtctg ttcgtctttgactgtttacacttaaatggggaaaatataatgcataaaccaatcaaggag agaaagaaaattttggaaacagagatgaaagaaattgccaatagagtcatgctatctgaa acacagtttattactgaccctgatgatcttcaaaccttgatgacaaaagtatttaaagaa ggtctagagggacttgtcttaaaagatattaatagcaaatatgaggcggggaagcgacac tggctgaagataaagaaggactatctagagcaggggacaatggccgactcggccgatctt gttgtgttaggcgcgtacttcgggacaggaaacaagggtgggatcatgtcaatctttctg cttggagcctacaatcccagcagtggcaagtggtgcacagtgaccaagtgtcacagcgga cttgacgacaagactctggaggaactgcagacgtcactagacatggtgaaaatcagcaag aacgcagacaaggtacccgattggctgaatgtgaagaagacggtggttccagactttgtg actagagaccctaaaaaatcgccggtgtgggaaatctccggggcggagtttagcaaggca gacatccacacggcggacggaatctccatccggtttccccgaatcactaaatttagggat gacaagacctgggaaaatgccaccgatgtacccaggctacggactctgttcaagaaatcc aaagaaacatcagacttgattccaagcaccagtaaaggaaccccaaagaaaaaatccccc aaggatgacaatgttgatgacaatgaaaatagcaatgggggaaatgacagtgggacagat ataaacagcgatgatgactcttataaatctcccctgaaaaccaccacccccatcaaagga aatgccactcccaccaaaaccacaccactaaagggcacacccatcaaaaatggggtgaag aggaaacacagtgacacagatgaagtggagattactccatccaagaagtcaaaaccactg tgtaagtatggttctgagtgttaccagaccaatcccaaacacctggagcaattttaccat ccaccaaagacacttccaaatgtgttcagaggttgcaagatattcctaccaccagacatc aaatcgtacagaatgttgagaagatacatagttggctgggatggtgaattggttccggaa tatgataaagcaacagctacacatgttattttacctcatggacataaaggagacgtcgtg aagtgtgctggagtgtgtttgactgatgactggatcaagctgtgtattaagaagaaaatg ttaatgaggacagacccctacatcgtgagtaacgatgatgacgaatga

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