KEGG   Crassostrea virginica (eastern oyster): 111138201
Entry
111138201         CDS       T09197                                 
Name
(RefSeq) nucleoporin GLE1-like
  KO
K18723  nucleoporin GLE1
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03013  Nucleocytoplasmic transport
cvn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111138201
   03015 mRNA surveillance pathway
    111138201
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvn03019]
    111138201
Messenger RNA biogenesis [BR:cvn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111138201
SSDB
Motif
Pfam: GLE1 MYG1_exonuc MHC_I_3
Other DBs
NCBI-GeneID: 111138201
NCBI-ProteinID: XP_022345767
UniProt: A0A8B8F0R0
LinkDB
Position
5:2264428..2271674
AA seq 771 aa
MTMSSIVTLLKASPKGRLVYRSDPNIDQEYFEEYLSPPKLSRPHQEVAAENSFCCHDDEE
TGQVYDTSDSDISDCIRNLHVEVKNNTRKTQKMKVHFDNENSNCATDFKIKICNKQAGPR
LMHGDLGTGLSNGMQIRIKNDFYDAEDKRKAKGSLREKPLDLPEFEKPQFQRIVVSPEYN
KSRLDIQDYEKELNHKAQKEVERKREQFKRAQRIINEKAEQRIDEYENRQLEKAKHQRHL
VEQHEQEGSAKLLEIQTKMKKNHLLHAKMVEEKKERIQEEVKRLEAERMKILEKTKTIVS
DSKTLLDRIKTMYSSFSSKLPENITKAIQGAQQRYNISQQIVSGEATVPGITNQQFVIIA
ENFRFLSNIHDFVKQSIQEIKEREKKEADAAAEEEARKKAEAEARRAQPPSVPVESPGQP
LVSSTPIPGATGTQGAPAGASPAAPEVRPQEGEVLCVDMGAFQEYTRLQQKLTETETAIQ
VLSSTQQLKKLKFDLQKAVNIPVNAISAVSGAHLRDKLQRLLVLLSGQQVEITNRRVSVS
EHPAALTFCKYLIAKMIVKKGEEQVSSIFESAFPLAAVTVGLLVDHSDIKDLLLGQFHSL
CPYTVPYHKPRQDQQSREDYHKALGYKYDSDGNVEKQDKFLKRMSGIMRLYASLMVSSPP
QRQSVHPFGLENAWLWLSRVMNIQPLPDVTATMVFDLLEVTGHALYREYRKQFLKMLHIL
IREFLPKLKSVASSGVGGPVSRLEALIKASIQRQGQIPPPEGLLPQNFWFS
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgacgatgtcgagtattgttaccctgttaaaggcttcgccaaagggacgattggtgtat
agatctgaccctaatatcgatcaggaatattttgaagaatatttgtccccaccaaagtta
agcaggcctcaccaagaagttgcggcagaaaacagtttttgttgccatgatgacgaagag
actggacaggtgtatgatacgtcagacagtgatatctctgactgtattagaaatcttcat
gttgaagttaaaaacaacaccagaaaaacacaaaaaatgaaggttcattttgataatgaa
aactccaactgtgccacagacttcaagatcaagatttgcaacaagcaggctggaccgcga
ctaatgcatggtgatttgggcactggtttgagcaatggaatgcaaatcagaattaaaaat
gatttttatgatgcagaggacaaacggaaggcaaagggctcgctgagagagaaacctctt
gatctgcctgagtttgagaaaccccaattccagaggatagtagtctcccctgaatacaac
aagagtagactagatatccaggactatgaaaaggagctcaatcataaagcacagaaagag
gtggagaggaagagggaacaatttaagagagctcagagaataatcaatgaaaaggcagaa
cagagaattgatgagtatgaaaatagacaactggaaaaagccaaacatcagagacacctg
gtggaacaacatgagcaagaggggtcagccaagttgttggaaattcaaacaaaaatgaaa
aaaaatcatctgttacatgccaagatggtggaagagaagaaggagaggattcaggaggaa
gtgaagagattggaagctgaaaggatgaagatcttggagaaaacgaagaccattgtgagt
gactccaaaacacttttggacagaatcaaaactatgtatagttccttctcatccaaactt
cccgaaaatattaccaaagccatccagggagcacagcagcgctacaacatatcacagcag
attgtgtctggcgaggccacggttccagggataacaaaccaacaattcgtcatcatagcc
gagaatttccgattcctctctaacattcatgactttgtcaaacagtccattcaagaaata
aaagagagagagaagaaggaagctgatgcggcagctgaagaagaggctcggaagaaagca
gaggctgaggcccgcagggcacaacctcccagtgtccccgttgaatcccctggacagcct
ttggtttcatccaccccaatacctggggcaacaggaacccagggggcaccagcaggggct
tcaccagctgccccagaagtcaggcctcaagagggagaggttctatgtgtggatatggga
gctttccaggagtacactcgactccagcagaagttaacagagaccgagacggccatacag
gtcctctcctccacccaacagttaaagaagttgaagtttgatctccagaaggctgtgaac
atccctgttaatgctatctctgctgtcagcggggctcaccttagggacaagttacagcgc
ctcctggtgttactctcaggacaacaagtggagataaccaacagaagagtctctgtttca
gaacacccagctgctctaaccttctgtaaatacctcatagccaagatgatagtgaaaaaa
ggggaggagcaagtctcgtcaatctttgagtcggccttcccgttggctgccgtgacggtc
ggcctgctggtggaccactcggacatcaaagatttgcttctgggtcaattccactccctg
tgtccgtacaccgttccctaccacaaaccccggcaggaccagcaatccagggaggactat
cacaaagcactaggatacaaatatgacagtgacggcaacgtggaaaaacaggataagttc
ctgaagaggatgtccggaatcatgcgactgtacgcttcgctgatggtttcctcccctcct
cagagacagagtgttcaccccttcggactcgaaaatgcatggttatggttgtcaagggtg
atgaacattcaacctcttccggacgtaacagctaccatggtgtttgacctgctagaggtc
acaggacatgctttatacagggaatacagaaaacagtttttgaaaatgctgcacatattg
atccgtgaatttcttcccaaactgaagtcagtggcctcctcgggggttggggggcctgtg
tctcgcctggaggccctgataaaggccagcattcagcggcagggacagattccaccccca
gagggcctactgccccaaaacttctggttttcttga

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