Crassostrea virginica (eastern oyster): 111138239
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Entry
111138239 CDS
T09197
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein homolog
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111138239
Membrane trafficking [BR:
cvn04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
111138239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
111138239
NCBI-ProteinID:
XP_022345818
UniProt:
A0A8B8F1Y0
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Position
5:65276047..65288900
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AA seq
786 aa
AA seq
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MRAFIVVNKINDVFFQDCDTEFTDHINKQAVEQGLLETGSYDEKILDSSIVMQLFSPLFM
SQWFLIEQRKNPCTSIACENGFLFVFKQFEELLIVAISKEESDTEQFLSKKIGVFIRVVE
FLYGPVTNEMGYSIFCRRTDRWQFLQNLLKTWELLRKEEHSFLVEAIERLHVNQLVNEKC
MEILEYAMSRLQNAGEKNTHHALLVVNSKLLSLYSNRSAPSLAEADVLCTILLARLLFPT
NEKLEDLFSYRKPDESGSFEDMKSPASITVTPPIERYESAVEGDDSMEEENYLSATDMPN
AKIKMTDNPYPAVSEHVTEEEIDLDTTNQKVLNVMGEGFQTPDSSSPVTDMHKVIQDNTG
RLTPIGRSRSRTFDGMVGGRVTPGPGRARSHSLNVHQHPRRDSPVSPTPIQEPVQPVSPV
IRSSPNHIRQIAFLSTQMCNFYPYQLDFVQIFPGMVIILFSEIPRANHASSLCQLLRLLT
DLLSGQKSQVQRVQGHVLYDLINTLLSKLASAMKKAKGNIERIMEDIRKRWDNADFKSSL
LAYLEQGAGTEIPPGAERSLTGLHKKVKELFLHLYLFPYEISPSVSQAMTSVCEKAKVKL
FDYKDYLSVKSQRNIVMTSYLDAYPGLVHFIYIDRRTNQLTAPSLNITEEGQNHDATQFL
KDKIWKITSWMHGKLADGVTMATAREGDYHFSYFIWFTDYQGAPVQIQQTYQQGDVSMPP
GLLSGQFYSTLKRHCFPNSLPGSINCYELIMMHVGLVNVQYIVSHRQKLAKQLFEASGDT
QMNLVL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcatttatcgttgtcaacaaaatcaatgacgtattttttcaggattgtgacaca
gagtttactgatcacatcaataaacaggccgtggagcaaggtttactcgagactggaagc
tatgatgagaaaatactggactcgagcattgtcatgcaattgttttcacccctattcatg
tcacagtggtttctcattgaacaaaggaaaaacccatgtacttccatcgcatgtgaaaat
ggatttctctttgtttttaaacagtttgaggaattgctgattgttgcaattagcaaagaa
gaatcagatactgaacagtttctcagtaagaagattggtgtatttattcgtgttgtagaa
tttctctatggaccagtaacaaatgagatggggtacagtattttctgcagaaggactgac
aggtggcagtttctacaaaatctactgaaaacctgggaactcttacgaaaagaagaacat
tcatttcttgttgaggcaatagaaagacttcatgtgaaccagcttgtaaatgagaagtgt
atggaaatcttggagtatgcaatgagtcggttgcagaatgcaggagaaaagaacacccat
catgcgttactagttgttaacagcaaattattgtccctttactcaaatcgaagtgcacca
tcactggctgaggcagatgtgctgtgcactatcttgttggcacgactgctgtttcccact
aatgagaaattagaagacttattttcctatcgtaagccagatgaaagtggctcatttgag
gacatgaagtcaccagcttccataacagttacaccacctattgagagatatgaaagtgca
gtagagggagacgactctatggaggaggagaattacctaagtgcaacagatatgccaaat
gctaagataaagatgacagataacccctatccagctgtatctgagcatgtaaccgaagag
gagattgaccttgacacaacaaatcagaaagtgttgaatgttatgggagagggatttcag
acaccagattcatcatcacctgtcactgacatgcacaaggtgattcaggataacacaggt
agattgactcccattggaaggagtcgtagtcggacatttgacgggatggtgggcgggcga
gtcacaccaggacctgggcgggccaggagtcatagtcttaacgtccaccaacatcctcgc
agagactctccagtgtcaccaacgccaatacaggaaccagtccagccagtatcccctgtt
atccggtccagtccgaaccacatccgacagatagccttcctatcaacccagatgtgtaac
ttctatccttaccaacttgactttgttcagatttttcctggcatggtcattatcctcttt
agtgagatacccagagccaaccatgccagcagcttatgtcagttgctacggttactgact
gatctgttgtcaggacagaaatctcaagttcaaagagttcaaggacatgtcctctatgac
ctaattaacacccttctctctaaattggcatcagcaatgaaaaaagcaaagggaaacatt
gagagaatcatggaggatatcagaaaacgatgggacaatgctgattttaaatcttctctc
cttgcttacctggaacaaggggcgggaacagagattccccctggtgcagagagatcttta
actggcctccataagaaggtcaaggagttatttttacatctgtaccttttcccttatgaa
atatctccatctgtcagtcaagccatgacctctgtttgtgagaaggccaaagtcaaattg
tttgactacaaagattacctgtctgtcaagtcacaaagaaacatcgttatgacttcatat
cttgatgcatatcctggactggttcactttatctacatagacaggagaaccaatcagctg
acagctccctccctcaacattacagaggaaggacagaaccatgatgcaactcagttttta
aaagacaaaatatggaagataacaagttggatgcatggaaaactggctgatggggttacc
atggcaacagcacgggaaggagattatcatttctcttacttcatatggttcacagattat
caaggagcacctgttcaaattcagcagacatatcaacaaggagacgtcagtatgccacca
ggcctcctttctggacagttctacagcacactgaaaagacactgttttcccaatagtctt
ccaggctccatcaactgctatgaactgattatgatgcatgttggtctggtgaatgtgcaa
tacattgttagtcacagacaaaagctagccaaacagttatttgaagcctctggagataca
cagatgaatctagttctgtga
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