Crassostrea virginica (eastern oyster): 111138241
Help
Entry
111138241 CDS
T09197
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5-like
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvn01002
]
111138241
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111138241
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111138241
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111138241
Peptidases and inhibitors [BR:
cvn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111138241
Ubiquitin system [BR:
cvn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111138241
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111138241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
EF-Ts_N
UBA_4
Motif
Other DBs
NCBI-GeneID:
111138241
NCBI-ProteinID:
XP_022345820
UniProt:
A0A8B8F0H4
LinkDB
All DBs
Position
5:complement(55391928..55403261)
Genome browser
AA seq
798 aa
AA seq
DB search
MEDLMPHLAKIKAPFGQEKVYKEECTFSFDNPETETGLYVCMSTFLGLGKKYVEWFYNKT
GNAVFLHIRRIRKEIEKRSESPPEKKPTKVAIGVEGGFNPDEKQFEFEESTSIVILPKWT
VIPLPNPELPDIAQISAAAILSAEDPLKAAEAAAMSNTWEGEERKVSKYAENLKQLDNGR
KIPPTGWKCEMCDLTSNLWLNLTDGSILCGRRFFDGSGGNNHAVDYYQKTGYPLAVKLGT
ITPEAADVYSYDEDDMVLDPYLDKHLAHFGINIKALEKTEKTMVELEIDINQKVGEWDVI
QEAGSKLSPLYGPGYTGMRNLGNSCYMNSTMQVLFTIPDFERRYTASTFDSIPNDPTTDF
TLQMTKLGNGLLSGDYSKPPQEGVDERLLPPTGIRPQMFKTLIGKGHPEFSTKRQQDAQE
FFLHIINILEKNTRGTVNPADCFKFQVEDRVQCTQSNKVKYASRSEYCLSLPVPMEAATN
KDDVTLYEAKKLELEAQGKKILDPKEIVRPRIPLSACIQSFAATETVDDFYSSAIKGKTI
AKKSTKLTTFPDYLMVHLKKFTIGDDWVPKKLDISVDVPDNLDLSSIRGRGLQPGEEELP
QEAEDPQEVQLDEGVVFQLVEMGFPMEACKKAVFNTNNSGVESAMNWVMEHMEDPDFNSP
FVPPGSKPKSGQFVPNEEGVAMVMAMGFNRDQAVKALKNTDNNVERAVDWIFSHTDELDT
PMETEAGGDTVPNTTYRDGEGKYKLVAFISHMGTSTMVGHYVCHIKKEGRWVIYNDEKVA
LSENPPRDLAYLYLYQRQ
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaggacttaatgccccatttggcaaaaatcaaagctccatttggacaggagaaagtg
tacaaagaagaatgcaccttttcatttgataatccggagacagaaacaggactatatgtg
tgtatgtctacttttcttggtcttggaaagaaatatgtggaatggttttacaataagaca
gggaatgcagtgtttctacacatcagaagaatacgcaaagaaattgaaaagagaagtgaa
tcgcctccagagaaaaaacccactaaggtagccataggagtggaaggtggcttcaaccca
gatgaaaagcagtttgagtttgaagaaagcacatcaattgtgatcctccccaaatggacg
gtgattcccctcccaaaccccgagctcccggacattgctcagatctcagcggcagccatt
ttgtcagcagaggacccccttaaggcagcagaggcagcagccatgtccaatacttgggag
ggggaggagagaaaagtgtccaagtatgctgaaaatctgaagcagcttgataatggtagg
aagattccgcccactggctggaagtgtgagatgtgtgacctgacctctaacctttggttg
aacctgacagatggcagcattctctgtgggaggcggttctttgatggaagtggtggaaat
aaccatgcggtggactactaccagaaaaccggttaccccctggctgtcaaactaggaacc
ataactcctgaagcggccgatgtgtactcctatgatgaagatgacatggttctggatcca
tatctagacaaacatttagctcattttggaatcaacatcaaagctctagaaaagacagag
aagacaatggtagagctagagattgacatcaaccagaaagtgggtgagtgggacgtgatt
caggaggcgggcagcaagttgtctcccctgtatgggcccggctacaccggaatgaggaat
cttggaaacagctgctacatgaactccacaatgcaggtcctcttcaccatcccagacttc
gagagaagatacacagcttcaacttttgacagcattcctaatgatccaacaactgacttt
actctacagatgacaaaacttggaaatggattactgtcaggagattactctaaacctcca
caagagggagtggatgaaagattactgccaccaacaggcatccgtccacagatgtttaaa
actttgattggcaagggccacccagaattctcaacaaagcgacaacaggatgctcaagaa
ttctttcttcacattatcaacattttagagaaaaatacacgaggcacagtaaaccccgct
gactgtttcaaattccaagtggaggaccgagtacagtgtacgcagagtaacaaagtgaag
tacgccagtcgctctgagtactgtctgtctctgcctgtccccatggaggcggccaccaac
aaagatgatgttacattatatgaagcaaagaagttagaattagaagctcagggcaaaaag
atattagatccaaaagaaattgtccgtcccagaattccactgtcagcgtgtattcaaagc
tttgcagcaaccgagacagtagacgatttctacagtagtgcaataaagggaaaaactatc
gctaaaaaatctactaaactaacaacttttcctgattatttaatggttcatttaaagaaa
tttacgattggtgatgactgggtgccaaaaaaattagatatttctgtggatgtcccagat
aaccttgacctttcatccattcgaggtcgaggtcttcagccaggagaagaagagctccca
caagaagctgaggaccctcaagaggtgcagttagacgagggtgttgtcttccagctggtg
gagatgggcttccctatggaggcctgtaagaaggccgtgttcaacacaaacaacagtggg
gtggagtcggccatgaactgggtgatggaacacatggaggatccagatttcaactctcca
tttgttccacccggaagtaaacccaaatctggacagtttgtcccaaatgaagaaggtgtt
gctatggtgatggccatgggatttaaccgagaccaggcagttaaagctctaaagaacact
gataacaatgtggagagagcagtggattggatctttagtcacacagacgagctggacacg
cccatggagacagaggctgggggagacactgtccccaacacaacatacagggacggggag
ggcaaatacaaactggtggctttcatcagccatatgggaacctcaacaatggttggtcac
tatgtatgtcacatcaagaaagaaggtcgctgggtcatctacaatgacgagaaggtggct
ctctcagagaaccccccgcgcgacctcgcctatctctacctttaccagcgacagtga
DBGET
integrated database retrieval system
