Crassostrea virginica (eastern oyster): 111138318
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Entry
111138318 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111138318
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111138318
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Paralog
GFIT
Motif
Pfam:
CREPT
CID
CTK3
DUF6123
Motif
Other DBs
NCBI-GeneID:
111138318
NCBI-ProteinID:
XP_022345925
UniProt:
A0A8B8F0T2
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Position
5:35089118..35098378
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AA seq
350 aa
AA seq
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MSSFSDNNFVKKLGELNNTQQSIQTLSLWLIHHRKHSKTIVQVWLREMQKVRASHXLTFM
YLANDVIQNSKKKGPEFTRDFATVLPDAYKFATKDADEKVKKSVDRILGIWEERAVYSKH
FIEQIRLCKPGAPSVSDSDLKSQRKKKVEEYVVTLKKKGFKVQNVEKPAPPTKRKKMDEM
PSLREEIDAMPKDENPSVPDAEELVKRLSDLEHSASSDAAVREKIAALPPEVSDINHLSK
SLVNKETAIKLFRQVEDACILLSEYNFRLNAELEERKQVGKMLRDFLTCQKDQVVKGEEK
LQESKQRLEKVGVVRQELMSHIRNLPDLTKLPDIDGGLAPLPSAGDLFSQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcattttctgataacaactttgtcaaaaagcttggcgagttgaataatacgcaa
cagagcatccagaccctatcgttatggttgattcatcacagaaaacactcgaaaacaatc
gttcaagtatggcttagagagatgcagaaagtgcgcgcaagtcatnagctgacttttatg
tatttggcaaatgatgtcatacaaaacagcaaaaagaagggaccagaattcacgagggat
tttgccacagttcttccagatgcttataaatttgccacaaaagatgcagatgagaaggtg
aagaaatcagtggacagaatcttaggaatatgggaggaaagagctgtatacagtaaacac
ttcatcgagcaaattcgactgtgtaaacctggagcaccctctgtctctgactctgacttg
aaatcccagcgcaagaaaaaggtggaggaatatgtagtgacgctcaagaagaaggggttc
aaagtgcaaaatgtagagaaacctgctcctcctacaaaaaggaagaagatggatgaaatg
ccatctctccgagaggaaattgatgctatgccaaaagatgaaaatccatcagttcctgat
gcagaagagctggttaagcggttgtccgaccttgagcactccgcctctagtgatgccgct
gtaagggagaagatagctgcattaccaccagaggtctctgatatcaaccatttatcaaaa
tcactggtcaacaaagaaacagctataaaactatttcgccaagtggaggatgcgtgtatt
ttattatcagagtacaatttccgcctaaatgcagaattagaggagaggaaacaggttggg
aaaatgttacgagattttctaacgtgccaaaaggaccaggtggtcaaaggagaggaaaaa
cttcaggagtccaaacaaagacttgaaaaagtaggtgtggtccgacaggagttgatgtca
cacatacggaatctccctgatctcaccaaactgccagatattgatgggggtttagcccca
ctaccctcagcaggagatcttttttcacaatga
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