Crassostrea virginica (eastern oyster): 111138323
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Entry
111138323 CDS
T09197
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30-like
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111138323
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvn01002
]
111138323
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111138323
04121 Ubiquitin system [BR:
cvn04121
]
111138323
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111138323
Peptidases and inhibitors [BR:
cvn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111138323
Membrane trafficking [BR:
cvn04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
111138323
Ubiquitin system [BR:
cvn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111138323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Spidroin_MaSp
Motif
Other DBs
NCBI-GeneID:
111138323
NCBI-ProteinID:
XP_022345938
UniProt:
A0A8B8F293
LinkDB
All DBs
Position
5:complement(6179476..6187338)
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AA seq
463 aa
AA seq
DB search
MDRKFWLIGGVTAAVISGAYVYWTSGRSNKKKDRCPGLENLGNTCFINSVLQALSSCSRV
RSWLSDCVNSGRLNRTSLTRTLNDVVKVLNNETECFDDVYNPEDVFKTLDSIGWRIYPDQ
QDAHEMFHVLTQTINEETMTYPGVVPLFENPDVGFIKNEQAVSRIRSPLPRLPHRSFDHP
FQGLLANQLQCVECGYKNPCRYDHFDSLSLTFPESLLVERSLETLLYHYVSVDTVSNVDC
LGCSNFKKRPPGCKDPLKKTTFKKKLTIGKLPQCLAIHIQRCQWMDNGTAHKRADFVKYP
EILDMSNYVYHKVAAKETRKDIQGGADSFLFGARNDQRAASFESAPSVTLLKTLNYDSRR
TQSGLFIQPQLEIQSPDSDVNHNGPTSVGGASDSSLLYKLSAVMVHIGGVASGHFLTYRR
SPNTVKGRCRRDKWLCCSDRSVTPVSKMDVFSAEAYMLIYERI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaaattttggttaatcggaggcgttacagctgctgttatttctggcgcgtat
gtctactggacttctggcaggtcaaacaagaagaaagatcgatgcccgggactagagaac
cttggtaatacttgcttcattaactcggtgcttcaagccttgtcctcctgttctcgtgtg
aggagctggctgtctgactgtgtcaacagcggccgccttaacaggacttccctcaccagg
actctcaacgatgtggtcaaagtgttgaacaacgagacagaatgctttgatgatgtttat
aacccagaggatgtgttcaaaactctagattccataggatggcgcatctatcctgatcaa
caggatgcacatgaaatgttccatgtattgacacagactattaatgaggagaccatgact
tatccaggagtcgttcccttgtttgagaatcctgatgttgggtttataaagaatgagcag
gccgtgtcccggatccgcagccccctcccccgcctgccccaccgctcctttgaccacccc
ttccagggtctgctggctaatcagctgcagtgtgtcgagtgtggctacaagaatccctgt
agatatgaccattttgacagcctctccctgactttccctgaaagtctcttggttgaacgc
agcttagaaaccctgctttatcactatgtgtctgttgatacagtgagtaatgtagattgt
ttgggatgtagcaacttcaagaagagacccccaggctgtaaggatccactaaagaagacc
acattcaagaaaaaacttactattggaaagctcccgcaatgcttggctattcacattcag
aggtgccagtggatggataatggaacagctcacaagagggcagattttgtcaagtatcca
gaaatcctggacatgagtaattatgtctaccacaaggtggcagctaaggagaccaggaag
gatatacaaggaggagcagacagcttcctttttggggcacggaatgaccagagagctgca
agctttgaatctgctccttctgttactctcttaaagactctgaactacgacagtcggagg
acacagagtggactgtttattcagccccagctggagatacagagtcccgactcagatgtc
aatcacaacggtcccaccagtgtaggcggagcctcagactcgtcactcctctataaactc
agtgctgtcatggtgcatatcggcggtgtcgcatctggacactttctgacatatcgtcgg
agtcccaacacggtgaaaggcaggtgtcgacgggacaagtggctttgctgctcagacaga
agtgtgacgcctgtcagtaaaatggatgtgttctcagcggaggcttacatgctcatttat
gagaggatatga
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