Crassostrea virginica (eastern oyster): 111138435
Help
Entry
111138435 CDS
T09197
Name
(RefSeq) ribosome maturation protein SBDS-like
KO
K14574
ribosome maturation protein SDO1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111138435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111138435
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
111138435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
ThiI_fer
Motif
Other DBs
NCBI-GeneID:
111138435
NCBI-ProteinID:
XP_022346110
UniProt:
A0A8B8F1B5
LinkDB
All DBs
Position
5:46194492..46205823
Genome browser
AA seq
251 aa
AA seq
DB search
MAYFQPTGQKRLTNVAIVRLKKGGKRFEIACYPNKVVSWRNKVETDIDEVLQTHAVFVNV
SKGEVAKNDDLKKIFGTDNHSEICLQILKKGELQVSEKERHAQLESMFRDIATTVSDKCV
NPKTNRPYTVTLIEKAMKDLHFSVKPNKSTKQQALEVIKQLKETETIDIQRALMRLRITV
QGKDGKKVKEKLKKLAARVEEEDFSPDLEMVILVDPGCFREIDDLVRTETKGKGQLEVIS
LKDIEEGDEML
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcttattttcagccaacaggacaaaaaagactgacaaacgtagcaatcgtaagactg
aagaaaggaggcaaacgattcgaaatagcatgttatccaaataaagtggtatcctggaga
aacaaagttgaaactgacattgatgaggtactccaaacacatgctgttttcgtaaacgtt
tcaaagggagaggtggcaaagaatgacgatctaaagaaaatatttggcacagacaaccat
tcagaaatttgtttacagatattgaaaaaaggtgaacttcaagtttctgaaaaggagcga
catgcccagttggaatctatgtttagagatatagcaacaactgtgtccgacaaatgtgtt
aatcctaagaccaatcgtccgtacactgtgacattgattgaaaaggccatgaaagatctg
catttttctgtgaaaccaaataaaagcaccaaacagcaggctttggaagtcataaaacag
ctgaaagagactgagaccattgatattcaaagggcactaatgaggcttaggattactgtc
caaggtaaagatgggaaaaaagtcaaagaaaaactgaagaagttagcagcccgagtggaa
gaagaggatttttctccggacctggaaatggtaatactggtagacccagggtgctttaga
gagattgatgaccttgtgagaacggaaactaaagggaaaggtcaattagaggtcattagt
ctaaaggatatcgaagagggtgatgagatgctatga
DBGET
integrated database retrieval system
