Crassostrea virginica (eastern oyster): 111138510
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Entry
111138510 CDS
T09197
Name
(RefSeq) gigaxonin-like
KO
K10453
kelch-like protein 16 (gigaxonin)
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111138510
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
111138510
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Kelch_1
Kelch_FKB95
BACK
BTB
Beta-prop_Calicin
Kelch_KLHDC2_KLHL20_DRC7
Kelch_2
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
NANM
DUF1668
BTB_BTBDG
FBA_1
Motif
Other DBs
NCBI-GeneID:
111138510
NCBI-ProteinID:
XP_022346233
UniProt:
A0A8B8F328
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Position
5:53166143..53173561
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AA seq
621 aa
AA seq
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MAHSAEKTDSDLPNRPQKFKCEKHASKILGALNSIRKKRHFCDGVVLIDGTEIPVQKGIL
AAASHYFRLVFDKENDCSSSSDSKGDNSSGLVDLSPLQITVETFEMILDYLYTSEIELDE
DNIQNILQAADLLLLGELKQACCEYLLKCITAHNCLGILDFASRFNCSWVYLKSTQFLEN
NFRDISFTAEFLQLPVDTVVSLLSMDTLQVHSEEDILHSMLRWVKHDEENRKIHLPVLVS
RCLRIQLLYKDSVKNLTEMYPDIHSLGVIPLIQDKERDQIGGRERPRGVTSLLMCAGGDT
RVMQNQEEPSGIRRDVYCFFVPPNPTKPGGLWLELPPMMKHRSSHSLVEAGGCLYAVGGK
DIEDRILATGEKYDPRANQWSPIARMNHARFGFGLVAIDDNIYAIGGSNDIKEPTTSMEV
YNIFSNKWTSLPDMNLRRVWSAYAVVGKKIYVIAGGMVGKLYESVECFDTTTNSWASVCP
MRERRCDARAAACRGNIYVFGGFRRYECPSAMHGGNNIKFCGTEIYCSAQDSWQQVPRGH
ECLCTMTDTSQIFSVVRNGEEIWVVGDLDMGGRFECIRAYNVFSRTWRTISVTGPPNCRG
YPCCMLHLPNHVIVNLLVKEK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggctcattctgccgagaaaacagattcggatcttccaaacagaccacaaaagttcaag
tgtgagaagcacgcgagcaaaattttgggtgctctcaacagcatcagaaaaaagagacat
ttctgtgatggagtcgtccttattgacgggacagaaatccctgttcagaaaggcattcta
gcagcggcgagtcactactttagattggtttttgacaaagaaaatgattgcagcagttct
tcagattccaagggagataacagttctggactggtagatttatctcccctacagattact
gtggagacctttgagatgattctggattacttgtacacgtctgagatcgagttggatgag
gacaacatacagaacatcctgcaggcagcggaccttctgctgctgggggaactcaagcaa
gcctgctgcgaatacctcctcaaatgcattactgctcacaactgcttaggtattctagac
ttcgcatccagattcaactgctcctgggtttacttaaagagcactcagttccttgaaaac
aacttcagagacatcagcttcactgcagagttcctacaacttcctgtggacacagttgtc
tcccttctgtccatggacacgcttcaggtccactccgaggaggatatactgcacagcatg
ctgcgctgggtgaagcatgatgaggaaaaccgcaagatccacctccctgtcctggtgtcg
cgctgtctgcggatccagctcctgtacaaggactcggtgaagaacctgacagagatgtac
cccgacatccacagcctgggggtcatccctctgattcaggacaaggagagagaccagatc
gggggcagggagaggccccggggggtcaccagtctgctgatgtgtgcgggaggggacact
cgggtcatgcagaatcaggaggagccaagtgggatcaggagagacgtttattgcttcttt
gtccctcccaatcccaccaagcccggcgggctctggctggagttacctcccatgatgaag
caccgctcctcccacagtctagtggaggctgggggatgtctgtatgctgttggggggaag
gatattgaggacaggatactggcaacaggggagaagtatgacccccgggcaaaccagtgg
agccccatcgctcggatgaaccacgcccgctttgggtttggactggttgccattgacgac
aacatttatgcaattggaggcagcaacgacatcaaagagcccaccacgtcaatggaggtc
tacaacatcttcagcaacaaatggacgtccctcccagacatgaacctgaggagggtgtgg
tcagcctatgcagtagtgggtaaaaagatctatgtcattgcgggcgggatggtgggcaag
ctgtacgagtcggtggagtgtttcgacaccactaccaacagctgggcctcggtctgtccg
atgagggagaggcggtgtgatgctcgagccgccgcatgccgcggcaatatctacgtgttt
ggaggattccgtcggtatgagtgtcccagcgcaatgcacggagggaacaacatcaagttc
tgtgggacagagatctactgctcggcccaggacagctggcagcaggtgccccgggggcat
gaatgtctgtgtacgatgacggacacctcgcagattttctcggtggtcaggaacggggag
gagatctgggtggtgggggacctggacatggggggacggttcgagtgcatccgggcgtat
aacgtcttctcaaggacctggaggacgatttctgtgacgggaccccccaactgtcggggg
tacccctgttgtatgcttcacctgcccaaccacgtgatcgtcaacctactggtgaaggaa
aagtaa
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