Campylobacter volucris: CVOL_0593
Help
Entry
CVOL_0593 CDS
T03558
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cvo
Campylobacter volucris
Pathway
cvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVOL_0593 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvo03019
]
CVOL_0593 (pnp)
03016 Transfer RNA biogenesis [BR:
cvo03016
]
CVOL_0593 (pnp)
Enzymes [BR:
cvo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CVOL_0593 (pnp)
Messenger RNA biogenesis [BR:
cvo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CVOL_0593 (pnp)
Transfer RNA biogenesis [BR:
cvo03016
]
Prokaryotic type
tRNA degradation factors
CVOL_0593 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
S1_2
CsrA
KH_2
S1_RRP5
KH-I_KHDC4-BBP
LAGLIDADG_3
KH_PARP14_8
Motif
Other DBs
NCBI-ProteinID:
AJC93911
LinkDB
All DBs
Position
566395..568503
Genome browser
AA seq
702 aa
AA seq
DB search
MEHVLNINNHIEIFETDKVAKQVAGAVLMREKNAVVLATVAREDKMVEEDFLPLTVQYIE
KAYAAGKIPGGYVKRETKPSDYETLSARIIDRSLRPLFPKGYAYPTQIVVMVLSADSEVD
LQVMSLNAASVALYLSDIAIKAPVCGVRIGKINDEFVLNPSNSELKSSTLDLYVAGVKDE
LLMIEMRALAGKKDGVHFMNELSEDETLRALNFASNAILRGSNAYEKAFAAYRKNSNLEY
KVENDNEELINFVKNSYLTKLKIAINQMAKSERASEIFQIAKEIEKENIAVEKEWTLEDI
QKALHVCKREIVRAQIINDGKRADGRGLKDIRKIDIETNILPSAHGSCLFTRGQTQALVV
ATLGGDNDAQMSDMLTEKNPICEKFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRAL
HPSVDNDYAHTIRLVSEILESNGSSSMATVCGGSLALKAAGVPSVKLVAGVAMGLIFEED
KYAILTDIMGLEDHDGDMDFKVAGSLEGITALQMDIKLGGIEQKVLQEALYQAKEARAYI
LNLMQEANSKIIINEAILPKIEIFNIDSNKIPDIIGQGGKTIKEIIEKFEVSIDLDRDKG
EVKISGSNKEMIEQSKEYILNLIHSKNTNKKRDKKEMPKFEIGEEFIGVVQKVVDFGVFV
GLKDGVDGLLHNSKIKEKLELGNEVKVKVLEIKNGKVSLDLA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgtattaaatatcaataatcatatagaaatttttgaaacggataaagttgcc
aagcaagtagctggagctgttttaatgagagaaaaaaatgctgttgttttagcaaccgtt
gctagagaagataaaatggtagaagaagattttctacctcttactgttcaatatattgaa
aaagcatatgctgcgggtaaaattccaggtgggtatgtcaaaagagaaaccaaaccaagt
gattatgagacattaagtgcaaggataattgatagaagtttaagaccattatttccaaaa
ggatatgcctatccaacgcaaattgtggtgatggttctttctgctgatagtgaagtagat
ttgcaggttatgagtttaaatgcagcaagtgttgcgttatatttaagtgacattgcaatc
aaagctccagtttgtggggtaagaataggtaaaattaatgatgaatttgttttaaatcca
agcaatagcgagttaaaatctagcaccttagatctttatgtagcaggtgttaaagatgag
cttttaatgatagagatgagagctttagctggtaaaaaagatggtgtgcattttatgaat
gagcttagcgaagatgagactttaagagcgctaaattttgcaagtaatgctatattaaga
ggttctaatgcttatgaaaaagcttttgctgcttatagaaaaaattcaaatcttgagtat
aaagttgaaaatgataatgaagaattgatcaattttgttaaaaattcatatctaactaaa
ctcaaaatagccattaatcaaatggcaaaaagcgaaagagcaagtgaaatttttcaaatt
gctaaagaaattgaaaaagaaaacattgctgttgaaaaagaatggactttagaagatatc
caaaaagctttacatgtgtgcaaaagggaaattgttagagcacaaattataaatgatggt
aaaagagctgatggtaggggtttaaaagatattagaaagattgatattgaaactaatatc
ttaccaagcgcacatggatcttgcttatttactagagggcaaactcaagctttggttgta
gctactttgggtggggataatgatgcgcaaatgtcagatatgcttacagaaaaaaatcca
atatgtgaaaaatttatggttaattataattttccaggattttcagtaggcgaagcaagt
cctataaaagctccaggtagaagagagctaggacatggaaatttggcaaaaagggctttg
catcctagtgtggataatgattatgcacatactattcgtttggtttcagaaattttagaa
agtaatggatcaagctctatggctacagtttgtggtggttctttggctttaaaagctgca
ggcgttcctagtgtaaaattagtagcaggtgtggctatggggcttatttttgaagaagat
aaatatgctatattaactgatattatgggacttgaagatcatgatggagatatggatttt
aaagttgctggaagtttagaaggtatcactgctttgcaaatggatattaagttaggtggt
atagagcaaaaggtattacaagaagctttatatcaagcaaaagaagcaagagcttatatt
ttaaatttaatgcaagaagcaaattctaaaataatcataaatgaagctatacttccaaaa
atagaaattttcaatatagattcaaataaaattccagacattataggtcaaggtggaaaa
accataaaagaaattattgaaaaatttgaagtcagcattgatttagatagggataaaggt
gaagtaaaaatttctggatcaaataaagaaatgatcgagcaaagcaaagaatatatttta
aatttaattcactcaaaaaataccaataaaaaaagggataaaaaagaaatgcctaaattt
gaaatcggtgaagagtttataggtgtggtgcaaaaagtagttgattttggtgtttttgta
ggattaaaagatggtgtagatggtttattgcacaattctaagatcaaagaaaaattagag
cttggtaatgaagtaaaagtgaaagttttagagattaaaaatggcaaggtctctttagat
ttagcttag
DBGET
integrated database retrieval system
