Campylobacter volucris: CVOL_1030
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Entry
CVOL_1030 CDS
T03558
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cvo
Campylobacter volucris
Pathway
cvo03420
Nucleotide excision repair
cvo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVOL_1030
03430 Mismatch repair
CVOL_1030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvo03400
]
CVOL_1030
Enzymes [BR:
cvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVOL_1030
DNA repair and recombination proteins [BR:
cvo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVOL_1030
MMR (mismatch excision repair)
Other MMR factors
CVOL_1030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
PcrA_UvrD_tudor
AAA_12
BPP1_LPA
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AJC94334
LinkDB
All DBs
Position
989358..991421
Genome browser
AA seq
687 aa
AA seq
DB search
MNLLEGLNQSQKEAVLHIDGAMLILAGAGSGKTKTITTRLAYLIDQVGIPAHHTLTLTFT
NKAANVMKNRALALIKNENLQTPLLCTFHKFGLLFLRLYSERISRANNFVIIDSDDKKKI
LKDLTNENLKNSLATIGAYISNFKNQSKSAQEIQKELEFLKDEKSKNYEEIIRTYEQYEN
FLIQNNFMDFDDLLMLTNKILEDEEFAKEQSKKYAYITVDEYQDTNALQYQILKKLCSSH
ENICVVGDDDQSIYGWRGAKIENILNFQEQFCNVKLIKLEQNYRSTNAILQAANELIEHN
RKRLGKTLICTKDKGEEIEILQNDDEKIESFKIAKEVFKLLKSNINPSQIAILYRVNALS
RALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNFNDDYSFKRIINRPKRNFGN
ATLQKLQDYALNNNLSLFEALCALVGNGFFTKKTDNEVEKFILSMHKLKEKENLLEIITS
LENEFKFKEFYKDNPEGEDKLLNIDEFYANLKDKISHGNYSKLDDILNEISLLNEQDGLD
QESICIMSIHASKGLEFDYVFIVGLEEGFFPLTSESSNIEEERRLAYVAITRAKKKLYLS
YANSRFYKGSRTKLDKSRFLGESNVIKKELTLDNNQKSYKKGDLIKHKIFGIGRITSVSK
FKNEEKLTINFGGIERMIMSSFVEKII
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattagaaggcttaaaccaaagtcaaaaggaagctgtattgcacatagatggt
gccatgctaatacttgcaggcgctggaagtggtaaaacaaaaacaattacaactagactt
gcttatttgattgatcaagtaggaattccagcccatcacactctcacactcacttttaca
aataaagctgctaatgtaatgaaaaatagagctttagctttaattaaaaatgaaaattta
caaactcccttactttgtacttttcataaatttggacttttgtttttaagattgtatagc
gaaagaatttcaagagctaataattttgtaatcatagatagtgatgataagaaaaaaatt
ttaaaagatttaactaatgaaaatttaaaaaactcattagctaccataggagcttatata
tctaattttaaaaatcaaagcaaaagtgcccaagaaattcaaaaagagcttgaattttta
aaagatgaaaaaagtaaaaattatgaagaaatcatccgcacttatgagcaatatgaaaat
tttttaatacaaaataattttatggattttgatgatttgttaatgctcacaaataaaatt
ttagaagatgaagaatttgctaaagaacaaagtaaaaaatatgcttatataaccgtggat
gaataccaagataccaatgctttacaatatcaaattttaaaaaaattatgttcaagtcat
gaaaatatctgtgtggttggagatgatgatcaaagtatttatggatggcgcggggctaaa
atagaaaatatcttaaatttccaagaacaattttgcaatgtaaaacttatcaaattagaa
caaaattatcgctctactaatgccattttacaagctgcaaacgaacttatagaacataat
agaaaaagattaggtaaaacactaatttgcacaaaagacaaaggtgaagagatagaaatc
ttacaaaatgatgatgaaaaaatagaaagttttaaaatagcaaaagaagtttttaaactt
ttaaaatctaatatcaacccaagccaaatcgctatactttatagagttaatgccctttct
cgtgctctagaagaagcttttagtaaagaaaaaattccttttaaattgctaagtgggatt
agattttatgaaagagcagaaattaaagatatcatttcttatttaagattattatctaat
tttaatgatgattattcttttaaacgcatcattaataggcctaaaagaaattttggtaat
gcaactttgcaaaaattgcaagattacgctttgaataataatttatcattatttgaagcg
ctttgtgctttagttggtaatggattttttactaaaaaaacagacaatgaagtagaaaaa
ttcatactaagtatgcacaaactcaaagaaaaagaaaatttattagaaatcatcacttct
ttagaaaatgaatttaaatttaaagaattttataaagataatcccgaaggagaagacaag
cttctaaacatagatgaattttatgcaaatttaaaagataaaatttctcatggaaattat
tccaaattagatgatattttaaatgagatttcattattaaacgaacaagatggcttagat
caagaaagtatttgcattatgagtatccatgctagcaaaggacttgaatttgattatgtg
tttatagtaggtttagaagaaggtttttttccgcttactagcgaatcaagcaatatagaa
gaagaaagaagacttgcttatgtggccattacaagggcgaaaaagaagttgtatttaagc
tatgcaaattcaagattttataaaggcagtagaacaaaactagataaaagcagattttta
ggtgaaagcaatgtaatcaaaaaagaattaactcttgataataatcaaaaatcttacaaa
aaaggtgatttaataaagcataaaatttttggcataggaagaattacgagtgtgagcaaa
tttaaaaatgaagaaaaattaactataaattttggcgggattgaaagaatgataatgtca
agttttgtggaaaaaatcatatga
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