Chlorella variabilis: CHLNCDRAFT_133050
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Entry
CHLNCDRAFT_133050 CDS
T02924
Name
(RefSeq) expressed protein
KO
K14315
nucleoporin NDC1
Organism
cvr
Chlorella variabilis
Pathway
cvr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHLNCDRAFT_133050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvr03019
]
CHLNCDRAFT_133050
Messenger RNA biogenesis [BR:
cvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CHLNCDRAFT_133050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
17359171
NCBI-ProteinID:
XP_005851718
JGI:
ChlNC64A_1_133050
UniProt:
E1Z287
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MAMANGLLANDVLLWKAIGAAVWAAAIAVAASGALGLMLSPATLFSPARLVGGSFSLSAW
LSATALVLAQAPAFAGAAAALRACEPRPAHLHRLLHWPRCAPASMLIGKLAARLGSVADA
ASTAAFFATHALSAALFLSVFAAAMGNAMGGARSTLQYSLWLATAYLLHWVHCSQDVLAF
PSVQRHRYFRMKQRLPRAAVQAAQLAAAAFSCAVTTSLLRSNVLGEASPGASGAPLTLGG
GTAALLAGALCTFCWLMSSAALEVVFTERLRPDDYSDRDVLRAMVACLAGKRGGLMQGLA
LHDASLLAGDVGRAALRRADMFADESGDRWKPVAVACIAELDAVSAAVGAALQQQKPAGG
AAGMPSAATQSHKWNGGLGSSKQQLDALLAVRCGYPRAAQAAQALAGFACASLKEDRFGV
LQLTQPGLGDVLLCLLGALGATQQLMRVTASLVPRQLSLGPWRGNGDAAAWAGCYSSPSV
DAAAYALQDTLTVALYRTSTTFGAGLGKVLADCTGKPAYGSASEAAALLQQFQRGQA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcgaatgggctgctagccaacgatgtgctgttgtggaaggccattggcgcg
gcggtgtgggcggcagccatcgccgttgccgcctcgggagccctggggctgatgctgtcc
cctgccaccctgttctcccctgctcgcctggtgggcggctcattcagcctgtccgcctgg
ctgtcagcaacagcgctggttctggcgcaagcccccgcatttgctggtgcggcggccgcg
ctgcgtgcctgcgagccgcgcccagcgcacctgcacaggctgctgcactggccacgctgc
gctcccgcctccatgctgatcggcaagctggcggcgcggctgggcagcgtggcagatgct
gcaagcaccgccgcctttttcgccacacacgctctctccgctgctctcttcctttccgtc
tttgccgccgctatgggcaacgctatgggaggtgccaggtcgaccctgcagtacagcctg
tggctggcgacggcttacctgctgcactgggtccactgcagccaggacgttctggccttc
ccatcggtgcagcgccaccgttacttccgaatgaagcagcgcctgccgagggcggcggtg
caggcggcccagctggctgccgccgccttttcctgcgctgtgaccacctcactgctgcgc
agcaatgtgctgggggaggcctcgcccggcgcctctggagcgccgctgacgctgggtggt
ggcacggcggcgctgctggccggtgccctctgcaccttttgctggcttatgagctccgca
gctctggaggtggtgtttaccgagcgcttgcgcccagatgactactcggatcgagatgtg
ctgcgcgccatggtggcctgcctggcgggcaagcggggcggtctgatgcagggcctggcg
ctgcacgatgccagcctgctggcgggcgacgtgggcagggcggcgctgcggcgggccgac
atgtttgctgacgaaagcggggacaggtggaagccagtggctgtggcgtgcattgctgag
ctggatgcggtgtcggcggccgtgggggcggcgctgcagcagcagaagccggcgggaggc
gcggccggcatgccctcggctgccactcagagtcacaagtggaacggagggctgggcagc
agcaagcagcagctggacgcgctgctggcggtgcgctgcgggtacccgcgcgccgcgcag
gcggcgcaggcgctggcgggctttgcatgcgcctcgctcaaggaagaccgctttggggtg
ctgcagctgacgcagcccggactgggcgatgtgctgctgtgcctgctaggtgcgctgggc
gccacccagcagctgatgcgcgtcaccgccagtctggtgccccgccagctcagcctgggc
ccctggaggggcaatggcgacgcggcggcctgggcaggctgctacagctctccatctgtg
gatgctgccgcgtacgcgctgcaggacacgctgaccgttgcgctgtaccgcaccagtacc
acgtttggggctgggctgggcaaggtcctggccgactgcaccggcaagcccgcgtacggg
agcgcatccgaggcggcggcgctgctgcagcagttccaacggggccaggcgtga
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