Chlorella variabilis: CHLNCDRAFT_134018
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Entry
CHLNCDRAFT_134018 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
cvr
Chlorella variabilis
Pathway
cvr04142
Lysosome biogenesis
cvr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
CHLNCDRAFT_134018
04148 Efferocytosis
CHLNCDRAFT_134018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvr04131
]
CHLNCDRAFT_134018
Membrane trafficking [BR:
cvr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
CHLNCDRAFT_134018
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
TPR_YpiA
Motif
Other DBs
NCBI-GeneID:
17354950
NCBI-ProteinID:
XP_005847817
JGI:
ChlNC64A_1_134018
UniProt:
E1ZET2
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MARDAAAAAKGGGGANRGGQGAAGGRHIDAFTLEHMLEEKRVACLEVWSHYVLVGLTDGT
LLLVSQRRRVPSSSSLAASDADGSSASAGTDAAQAAQQAPGQPPPWAVVQSLRNFGKGQI
KQLQVARERSMLLCLADDGVNAYVLPGLRLKAQAGRSRGASLFAWHGGSDTLAVVTKKRL
ALFKYEGLEFVFQREAYFPDAPTCMQLYMTVDVATAIVTPLFTTKGPAASMVPVSATEVL
LARDSSGVLYGPEGRPSKRGGGSGAVDWAVPPAVLAVSEPYAVAVSEAGVEARLLQPLNA
ADLWQQLALALPAAATSCGVAPTAAADGSLFLASRGTGAIKQLRPVSFARQAEQLLGLGE
HEEALAMAALIPLEQAEERRQLEDIIHLGYGRLLFRQGQYEEAMLHFGMSGLAGPLHLLR
LFPSLAPPKLLAAAAAEQAAAAAEAAAASAVAGEGVGTREPSQAGEQAAAEAVQELEEAA
DAEPQGEAFVAAVQVVTPYLLSHRSRLAAAAASPARPATLLGGGGGSQQHTPQAVAGLAG
EVEVEMGPSPSTRAVMVQQQLEGSATAALLDTSLLLALLAMPDSGALLRFVHRPNCVDLE
AGEAALKGSGRYSELVALYQTKGRHSAALELLHALSQSPEQLPSPPQGAAAELRGLPGVW
AAVKYVCHMPEGERDLGLISTHAKWMLAADPDAGLEMFGSMDPPLPPSAVLPMLTSYAPQ
LAGLYLEAALATGAADPSVYEQELARIYLERIARSTSSTIGAAKGAGAGKAAGKPAGKGA
AKVAGEAAEGVVDEAAVPEYGKLKQLILSSCRLNYEALLLVIPQHRMLEIRAALLERLGR
HTEALRIYIHRLRQLGAAEAYCDRVYQRRQQQLREQRHAELAAALRWQRQAASAAAGSGG
AAPAGWASSSIAGLGGSSGSIRSLQFGGGGHSGSGTNLHAAGVPATKLQRAAGSGGDSED
GADIYLLMVQVLLEEEDSSGTFHHVEHAPDHAVWGEVPLASALPFLEGALWGAGERRRTA
AVARNLRRSEHVGLLGELADARQRHVLLTPERNCSICYKRVGSAALVVFPTGMLAHYSCH
RRASGAGQQASGRASADGTANGRVAVGAGGGSSFREWS
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagatgcggcggcggcggccaagggcggtggcggggcaaacaggggcggccag
ggcgcggccggtggcaggcatatcgatgccttcacgctagagcatatgctggaggagaag
cgggtggcgtgcctggaagtgtggagccactatgtgctcgtcggcctgacagatggcacg
ctgctgctagtctcccagcggcggcgggtgcccagcagcagcagcctggcagccagcgac
gccgatggctcgagtgccagcgccggcaccgatgcggcccaggcagcgcagcaggcgcca
ggccagccgccgccatgggccgtggtgcagtcgctgcgcaactttggcaagggccagatc
aagcagctgcaggtggcacgcgagcgctccatgctgctctgcctggcagacgatggcgtg
aacgcctatgtgctgcccggcctgcggctcaaggcgcaggcggggcgcagccgcggcgcc
agcctgtttgcctggcacggcggcagcgacacgctggcggtggtgaccaagaagaggctg
gccctgttcaagtatgaaggcctggagtttgtgttccagcgggaggcttacttcccagac
gcgcccacctgcatgcagctgtacatgactgtggatgtggccaccgccatcgtgaccccc
ctgttcaccacaaagggccccgcagccagcatggtgcctgtgtctgccacggaggtgctg
ctggccagggacagcagcggggtgctgtacgggccagagggccgcccctccaagcgcggc
ggcggcagcggcgccgtggactgggcggtacctcccgctgtgctggcagtcagcgagccg
tacgcggtggcggtgtcggaggcaggggtggaggcccgcctgctgcagccgctcaatgcc
gcagacctgtggcagcagctggcgctggcgctgccggccgccgccacctcatgcggggtg
gctcccaccgccgccgcggatggctcgctcttccttgccagccggggcacgggcgctatc
aagcagctgcgccccgtgagctttgcgcggcaagcagagcagctgctgggcctgggagag
cacgaggaggcactggctatggcagccctcatccccctggagcaggctgaggagcggcgg
cagctggaagacatcatacacctgggctatggccgcctgctgttcaggcaggggcagtac
gaggaagccatgctgcactttggcatgagcgggctggcggggccgctgcacctgctgcgc
ctcttcccctcgctggcgccgcccaagctgctggctgccgccgccgccgagcaggctgct
gccgcggcagaggctgctgctgccagtgctgttgcgggcgagggagtgggcactcgcgag
ccttcgcaagcaggggagcaggcggcggcagaggcggtgcaggagctggaggaggcagcc
gatgcggagcctcagggggaggcgtttgtggcggcggtgcaagttgtgacgccctacctg
ctcagccaccgcagccggctggcggcggcagcggccagccccgctaggccggccacgctg
ctcggcggcggcggcggctcgcagcagcacacgccccaggcggtggcaggcctcgcaggg
gaggtggaggttgagatgggccccagcccttccacccgggcggtgatggtgcagcagcag
ctggagggcagcgccaccgccgccctgctggacacctcactgctgctggccctgctggcc
atgcccgatagcggcgcgctgctgaggtttgtgcatcgcccaaactgcgtggacctggag
gcgggcgaggcggcgctcaaggggtcggggcgctactcggagctggtggcgctgtaccag
accaagggccggcactcggcggcgcttgagctgctgcacgcgctgagccagagcccggag
cagctcccgtcaccgccgcagggcgcagcggcagagctgcggggcctgcctggcgtgtgg
gcagctgtcaagtatgtgtgccacatgccagagggggagcgagacctgggcctcatctcc
acgcatgccaagtggatgctggcagccgaccccgacgccgggctggagatgtttggcagc
atggacccgccgctgccgccctctgcggtgctgcccatgctcacctcttacgcaccacag
ctggcaggcctgtatctggaagcagcgctggccacgggcgccgctgacccctccgtttat
gagcaggagctggcacgcatatacctggagcgcattgcccgcagtaccagcagtaccatc
ggcgccgccaagggggcaggcgctggcaaggcggccggcaagccggctggcaagggcgct
gctaaggtggctggcgaggcggcggagggtgttgtggatgaggcggcggtgcctgagtat
ggcaagctgaaacagctgattctgagcagctgccggctcaactatgaggcgctgctgctg
gtgataccgcagcatcgcatgctggagatccgcgccgcgctgctggagcggttgggcagg
cacaccgaggcgctgcgaatctacatccaccgcctgcgccagctgggggcggcggaagca
tactgcgaccgcgtgtaccagcggcggcagcagcagctgcgcgagcagcggcatgccgag
ctcgccgcggcgctgcggtggcagcgccaggccgccagtgccgcggcaggcagtggcggc
gcggcgcctgctggctgggcttccagcagcattgccggcctggggggcagcagcggcagc
attcgcagcctgcagtttggcggcggcggccacagcggcagcggcaccaacttgcatgct
gcaggggtgcctgccaccaagctgcagcgggcagcggggagcggcggcgacagcgaggat
ggagccgacatttatctgctcatggtgcaggtgctgctggaagaggaggacagcagcggc
accttccaccatgtcgagcacgcgccagaccacgctgtgtggggcgaggtgccgctggcc
agcgcactgccgttcctggagggagcgctgtggggcgcgggcgagcggcggcgcaccgcc
gcggtggcccgcaacctgcgccgctcggagcatgtgggcctgctgggcgagctggcagat
gcgcggcagagacatgtgctgctgacgcccgaacgcaactgcagcatctgctacaagagg
gtcggcagcgcggcgctggtggtgttccctaccggcatgttggcgcactacagctgccac
cggcgggcctctggggctgggcagcaggcgtcggggcgcgcgtcagcagacggcacggcc
aacgggcgagttgcggtgggcgcgggcggcggcagcagcttccgcgagtggtcctga
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