Chlorella variabilis: CHLNCDRAFT_134254
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Entry
CHLNCDRAFT_134254 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
cvr
Chlorella variabilis
Pathway
cvr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHLNCDRAFT_134254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvr03019
]
CHLNCDRAFT_134254
Messenger RNA biogenesis [BR:
cvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CHLNCDRAFT_134254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
CENP-Q
DUF4515
HAUS-augmin3
APG6_N
NDC80_loop
Motif
Other DBs
NCBI-GeneID:
17354801
NCBI-ProteinID:
XP_005847401
JGI:
ChlNC64A_1_134254
UniProt:
E1ZFL7
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAGFGGFGGFGGGFAFGAPAASSAAASPFGTPASSAGLSFGAASTPAFGFGAPSSAAAAT
PGFGAPASSAAAGGLSFGAPASAAAPAVGGFSFGAPASSAAAAAPAFTGFGAVAASTPAA
AALASSAAAGLSFGAPAATGGFSFGGASSAAATGLSFAAPASAAAASTGLSFGTPASSAA
AGTGLSFGAPASAAAASTGLSFGAAPTPAAATGGGFSFGGAPAAASSAAAAAGTSAPAFS
FASAPAAASSAAAAAPATGAGFSFASAPAAASSAAPAASAAAASTPAFGFGAASTPAAAA
ASAPTAAAASAPVAGAPAAAGTTPVAALQAPSEVKGKPVDDIINEWNAELEARSRSFVKH
AEALAQWDSSILSNRRALLELEEELRRVVRGQESLEKKLQMLETHQKGIHDALVGMEGEA
ERLYREERPLLDDDSRERDRLYERAEKVGALLSHLGEQLKEAIADVNDSTSASLGDTAAP
LGKAVRILNNQLQALAQADARIEELSQRVADLHPN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctttggagggtttgggggctttggtggcggcttcgcatttggcgctccggca
gcctccagcgcggcagcctcgccctttggcaccccagctagctcggcaggcctcagcttt
ggcgcggcatcgacgccagccttcggctttggcgcacctagctccgctgcggcagccacc
cctgggtttggcgccccagccagctcggcagcagcagggggcctgagctttggagctcct
gctagcgctgcagctcccgcggtcggcggcttcagctttggtgcgccggcatcctctgcc
gccgccgccgctcccgccttcacaggctttggtgccgttgcagccagtacgcctgcagcc
gcggctctggcatcctctgcagctgcgggcctgagctttggcgccccagcagccacaggt
ggcttcagttttgggggcgccagcagtgccgcagccactggattgagttttgcggcacca
gccagcgccgcggctgccagcaccggcctcagctttggcaccccggcaagctcggccgcc
gccggcaccggcctgagctttggcgcaccagccagcgctgcggctgccagcaccggcctg
agctttggcgccgcacctacccctgcggcagccactggcggcgggttcagctttggcggt
gcacccgcggcagcatcctccgcagcagctgccgcaggcacctctgccccggccttctcg
tttgcctcggcacctgcagccgcatccagtgccgcagcagcagcgccggcaacaggtgcc
ggcttcagtttcgcaagcgcccccgcagccgcctcgtcggcggccccggcggcctctgca
gcggcagcctccaccccagcattcgggtttggcgcggcctccacccccgcagcagcagca
gcctctgcgcccacggcagcagctgccagcgcgcctgttgcgggggcccccgccgcagcc
gggaccacgccggtggcggcgctgcaggcacccagcgaggtcaagggcaagccagtggac
gacatcatcaacgagtggaatgctgagctggaggcccgctcccgatcctttgtgaagcac
gcagaggcgctggcgcagtgggactcgtccatcctgtccaaccgccgtgcgctgctggag
ctggaggaggagctgcggcgggtggttcgggggcaggagagtctggagaagaagctgcag
atgctggagacgcaccagaagggcatccacgatgcgctggtgggcatggagggggaggcg
gagcggctgtaccgggaggagcgcccgctgctggacgacgactccagggagcgggaccgg
ctgtacgagcgggcggagaaggttggcgcgctgctgtctcacctgggggagcagctcaag
gaggccatcgctgacgtcaacgactccacatccgccagcctgggcgacaccgccgcgccg
ctgggcaaggccgtgcgcatcctgaacaaccagctgcaggcgctggcgcaggcggatgcc
cgcattgaggagctgtcgcagcgggtggcagacctgcaccccaactga
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