Chlorella variabilis: CHLNCDRAFT_134588
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Entry
CHLNCDRAFT_134588 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K24940
CWF19-like protein 2
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_134588
Spliceosome [BR:
cvr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CHLNCDRAFT_134588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
MFS_1
Motif
Other DBs
NCBI-GeneID:
17354563
NCBI-ProteinID:
XP_005847356
JGI:
ChlNC64A_1_134588
UniProt:
E1ZG93
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MRSHQHSPPHQEAQPLLRELWDTRAWRLFPLLLVYMSGLTLLVPHVPGIMTDYFAERRAG
HTLHCDGLPSDAAAPDAAACRDAHADVVLWSSWTSFFSNSLVSIVLTPLLGHWSDLHGRK
LFFLACSCIPLAIVLLHLTSGLPLLWYYVVQVFISSLSSVTVSLAYIADLLCRANRAATF
GLIMAIFSVAIFIGPAAGAAMAPVTAALASLGTVGACAAYTLLILPESLSPGAKAAARLC
HAQHRHQDAAPGAPGSPGGSSGGGGGGGGVVALSTLRAARILLRSPLFKRLTLCMMLTGV
VSEGLQDLLVQYLKLKMEFGVADVSHIFMIFGACGLLVQTLLLRTLLNWLGEQRVLLVAL
AASAVQQVILAAAGVKWVAFLGIGLGSLGSMSFPTISSIKSNNAQASRGAPFVFGLVLML
LAIAVAATIPSTAGGSGGSIERQAAMPGGSSQGGGSDRESLLRKGVDGVAAAEAPWPAGE
EAGAAAAARGGSRRRSGDLEGGGGSAAAEQSRIEKKSSKHKKQHDSSSGGGGGSSDEGGK
LGGGGRRRGRGQPWDDPSSGSDSDGEGGLASGAQREDWMTKPMQRPKTDAQLAAEEEEQE
RQEEEEQRRDPDRPFVSERELNPYFKDGGSGVPGEGAAAGAPPVRPAAGIGDGGASWRLK
ALKRAQQQAEQEGKKLNEVVSERFGSLAELTGGLTAGRRAAHGMAHLHSARDRRATDPEF
GARQAERRRMREGEEGGGGGEGGKGGKGREGDKAAYLSEMKSVRSQMQRPREAGSLSWRR
GSECGERRQEGGPPGARRDGGDRGGGDGDRRREGERRGDRGDRGGGGDRDRRREDEAGER
RRDREQHRGDRPRDDRPARGREEAEGRRRPARDPLGRHEDAAVLKAAAAELNQFQADGSF
MDQFQAMQQQQQGGREGGEERPGAGAEVQPSASSGSDSEEAREAQRRQERPSAAAAMAAE
RASLAARPAAAAAGPAAEAGGGDGGEQRPAARSGGGGGANNLSVAAMLRARLTGKAPPPE
AQAPPERETVVLPQVDARGRAVPGAFGREEAGTGLLDGGRKQKRVQRYEGGERSKYFADD
DDTDLQTLMKRTKHGDEGDIDARLAAGITRSQRYKQADYDPDAEYDHDAGLEMLDKRAGK
KGREGQQQRDKQRQIREYNRMNSALEKCRLCFSSASRPRHLAVAIGQSSYLALPARGRLV
PGHCVIVPAEHVASTRQVDEQVWSELRNFKKCLIQMFMKQASGQEVVFFETALHLGSMRS
HAVVECVPVPPAVAGRAPMFFKKAVDDATSEWAQHHAKRFIDTKAKGLRGSVPPNFPYLN
VEFGISDGFVHVVDDEEKFDPGLARSVMIGLLSLPQEDMHRRARQENPSIQQQWAEEFRK
QFEPYDWTRMLE
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccaccaacacagtcctccacaccaggaggcccagccgctgctgcgggagctt
tgggacacccgcgcgtggcgcctgttcccgctgctgctcgtctacatgtctgggctcacc
ctgctggtgccccacgtccccggcatcatgaccgactactttgctgagcggcgagccggc
cacacgctgcactgcgacggcctgccctccgatgccgccgcgcccgacgccgcggcctgc
cgggacgcgcacgcggatgttgtgctgtggagctcctggacttccttcttctccaactca
ctcgtgtccatagtgctgacgccgctgctgggccattggagcgacctgcacggccgcaag
ctgttcttcctggcctgctcctgcatcccgctcgccatcgtgctgctgcacctcacctcg
ggcctgcccctgctctggtactacgtggtacaggtcttcatctcctccctctcctccgtc
accgtctcgctggcctacattgccgacctgctgtgccgcgccaacagggccgccaccttt
ggcctcatcatggccatcttcagcgtggcgatcttcatcggcccagccgccggcgccgcc
atggcacccgtcactgcagccctggcatcccttggcaccgtgggcgcctgtgccgcctac
accctgctgatcctgccagaatcgctgtcgcctggggccaaggcagcggcacgcctgtgc
cacgcgcagcaccgccaccaggacgccgcccccggcgcaccaggcagcccgggaggcagc
tcgggaggcggcggcggcggcggcggggtggtggcgctgagcacgctgcgcgcggcgcgc
atcctgctgcgctccccgctcttcaagcgcctcacgctgtgcatgatgctgacgggggtg
gtgtcggaggggctgcaggacctgctggtgcagtacctgaagctgaagatggagtttggg
gtggcggatgtgtcccacatcttcatgatctttggcgcctgcggcctgctggtacagacc
ctgctgctgcgcaccctgctcaactggctgggggagcagcgcgtgcttctggtggcgctg
gcggcctctgccgtgcagcaggtcatcctggcggcggcgggggtcaagtgggtggccttc
ctgggcatcggcctgggctccctgggcagcatgagtttccccactatcagcagcatcaag
tccaacaacgcacaggcaagccgcggcgcaccctttgtgttcggcttggtattgatgctg
ctggccatagcggtggctgccaccatcccctccacagcgggcggcagcggcggcagcata
gagcggcaggctgccatgccgggcggcagcagccagggcggcggcagcgacagagagtcg
ctgctgaggaagggtgtggatggggttgcagctgcagaggcgccgtggcctgccggggag
gaggccggggcagctgcagcggcgaggggcggcagcaggcggcggtcgggagatttggag
ggcggcggcggcagcgcggcagcggagcagagcaggattgagaagaagtcgtccaagcac
aaaaagcagcacgactcctcaagcggcggcggaggtggcagcagcgacgagggcggcaag
ctgggaggcggcgggcgacggcgcgggcgcggccagccctgggacgacccttccagcggc
agcgacagcgacggcgagggaggcttggcgagcggggcgcagcgggaggattggatgacc
aagcccatgcagcgccccaagacagacgcgcagctggcggcagaggaggaggagcaggag
cgccaggaggaggaggagcagcggcgggaccccgaccgtccgtttgtgtcggagcgagag
ctgaatccctacttcaaagacggaggcagcggcgtgcccggggagggcgccgcggcaggg
gcgccgcccgtgcgccccgcggcgggcattggcgacggcggcgccagctggcgcctcaag
gccctcaagcgcgcgcagcagcaggcggagcaggagggcaagaagctgaatgaagtggtg
tctgagcggtttgggtcgctggctgagctgactggggggctcacggctgggcggcgggcg
gcgcacggcatggcacacctgcactctgctagggaccggcgcgccaccgaccccgagttt
ggggcgaggcaggcggagcggcggcgcatgcgggagggcgaggagggcggcggcggtggc
gagggagggaaggggggcaagggacgggagggcgacaaggccgcttacctgtcggagatg
aagagcgtgcgcagccaaatgcagcggccacgcgaggcgggcagcctgtcgtggcggcgc
ggcagcgagtgtggggagcggcggcaggagggcgggccgcctggcgcgcggcgggacggg
ggcgaccgcggcggtggcgacggggacaggcggcgggaaggggagcgcaggggcgaccgc
ggcgaccgcggtggcggcggtgacagggacaggcggcgggaggacgaggctggcgagcgg
cggcgggatcgggagcagcaccgcggcgaccggccgcgggacgaccgcccggcgcggggc
agggaggaggcagaggggcggcggcggccggcgagggacccgcttggtcgccacgaggac
gccgccgttctcaaggctgcggcggcagagctcaaccagtttcaggcagacggttccttc
atggatcagttccaggcgatgcagcaacagcagcagggtgggagagaaggcggggaggag
cggcccggggcgggcgcagaggtgcagccgtcagcttccagcggcagcgacagcgaggaa
gcaagggaggcgcagcggcgccaggagcgccccagcgcggcggcagccatggcggccgag
agggccagcctggcggcccgccccgcagcggcagcagcagggccagcagcggaggcaggc
ggaggcgacggcggcgagcagcggccggctgcgcgcagcggcggcggcggcggcgctaac
aacctgtcggttgcggccatgctgcgggcgaggctgacggggaaggctccgccaccagag
gcccaggcgccgcctgagcgcgagactgttgttctgcctcaggtggatgcccggggcagg
gcggtgccgggcgcctttgggcgggaggaggcagggacaggcctgctcgacggagggcgc
aagcagaagcgagtgcagcggtacgagggcggcgagcgctccaaatactttgccgacgac
gacgacacagacctgcagacgctgatgaagcgcaccaagcacggcgacgagggcgacatc
gatgcgcggctggcggctggcatcacgcgcagccagcggtacaagcaggcagactacgac
ccagatgctgagtacgaccacgatgcggggctggagatgctggacaagcgggcgggcaag
aagggcagggaggggcagcagcagcgcgacaagcagcgccagatacgggagtacaaccgc
atgaactcggcgctggagaagtgccgcctgtgcttctcctcggcctcccgcccccgccac
ctggccgtcgccatcggccagtcctcctacctggcgctgcccgcccgcggccgcctggtg
ccgggccactgcgtcattgtgcccgcggagcacgtcgcctcaacgcggcaggtggacgag
caggtgtggagcgagctgcgcaacttcaagaagtgcctgatccagatgttcatgaagcag
gcgagcggccaggaggtggtcttcttcgagacagcgctgcaccttggcagcatgcgcagc
cacgcggtggtggagtgcgtgccggtgccgcccgcggtggcggggcgcgcccccatgttc
ttcaaaaaggcggtggatgatgccaccagcgagtgggcgcagcaccacgccaagcgcttc
atcgacacaaaggccaagggcctgcgcggctccgtcccccccaacttcccctacctcaac
gtcgagtttggcatctcagacggctttgtgcacgtggtggacgatgaggagaagtttgac
ccggggctggctcgctcggtcatgattggcctgctgagcctgcctcaggaggacatgcac
cggcgggcgcggcaggagaacccctccatccagcagcagtgggcggaggagtttaggaag
cagtttgagccgtatgactggacgcgcatgctggagtga
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