Chlorella variabilis: CHLNCDRAFT_134697
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Entry
CHLNCDRAFT_134697 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cvr
Chlorella variabilis
Pathway
cvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLNCDRAFT_134697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvr03019
]
CHLNCDRAFT_134697
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_134697
Messenger RNA biogenesis [BR:
cvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CHLNCDRAFT_134697
Spliceosome [BR:
cvr03041
]
Complex B
Other components
Prp19-related factors
CHLNCDRAFT_134697
Complex C
CHLNCDRAFT_134697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
Josephin
HAT_PRP39_C
HAT_PRP39_N
Metallophos
Suf
Mad3_BUB1_I
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
17354249
NCBI-ProteinID:
XP_005847048
JGI:
ChlNC64A_1_134697
UniProt:
E1ZGJ7
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MAESAPGYHERQRLQQCLLHTLNNLFQQRVFDSVELDGIANQLAPGRLPILHPHRTLFLG
NWDVNVMELALRRHGKKLHWCDLRDLSFAHLDLDACWGLLLNVKGEGALSRILGGRHWLA
LKSFGGRWWDLDSTLPAPQPIGSSSCAAAVSVGSRVEGSDLHAEASGSSGNGGSDTHHAG
HATEDGEAAAAAAALWHAYLSERLVAVRGLSPAHPAVESLNNTFERAMVSMHKMPRIWLM
YLDFMAVQAYITRMRRLFDRALTSLPVTQHERVWPLYLRFIGQPGIPMETAVRVYRRYLK
LEPTHAEEFIAYLKIKQLWGEAARAVRTVDPDKAVGKPHTLWVAFAKLYERHSDLPNARI
IFEKAAQARLKYVDDLAAVWCEWAEMELRHKNFRRALDVMRRATQRPARTRSREEEAGLP
VQERLYRSLKLWSFYVDLEESLGTLDSTKEVYEAILDLRIATAQIVLNYAALMLEHKFFE
EAFRVYERGISLFKYPHVKDIWTAYLTQVREVYESAIEAQPPYALTDGDTRTLCLRYAAL
ERRLGEVDRARAIFVHAASLADPRSDRDFWAEWNAFEVKHGNEDTFREMLRIKRSVAASF
SQQHFNTTIIDAAAVVGEAGAKRKREGGDDMAALEAAVAGAAAAPAPAALEPGTRVRGFV
SAGVIQQGKEEEAAAAGGGAAAAPANPEELELGEEEEEAEEAAGEGDGGDGEDGVQVQQQ
AVPEGVFGSLGDKFAKRQKIEGADGTFRILQLADLHVGEGQSDSKTLEVVQTVLEAEQPA
LVVMSGDQVSGFAYPAANLLGHLSRLLFSGASWYEQQWRRIVAPLHKAGVRYAAILGNHD
GEADLSRRQVVELGGAAGGGLSLTQPGPSHLTGAGNYYLDVCDAQGQQVAARIWMLDSGN
RGCGRLAWGWGCVGADTVAWVRREAEQLPRVPSLAFIHVPIPQMFQAWNGGSSANGTKGE
LVGCPGMDSGFFELAREMGIHAIYSGHDHNNDFAASLDGIRLAYGRKTGYGSYGPTGGLL
HGARVIELRLGQDTAHSPTWIRQEDGSRREQADVNAPRPFRQQVCALDESSCDTHLGPEF
CLRLREARSFFVVAGVTLTVAAACVFTGLAAGALARHARRGWRQTRGWEQVAAADSSPHD
VDTSV
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagcgcgccgggctaccatgagcggcagcgactgcagcagtgcctcttgcac
acgctgaacaacctctttcagcagcgagtgtttgatagcgtcgagctggacggcatcgcc
aaccagctggcacctggccggcttcccatccttcacccacacaggacactattcctgggc
aactgggatgtcaatgtgatggagctggccctcaggcggcacggaaagaagctgcactgg
tgcgacctgcgcgacctgagctttgcgcatctggacctggatgcgtgctggggtctgctg
cttaacgtcaagggcgagggcgctttgagccgcatacttggcgggcggcactggctggcg
ctcaagtcgtttggcgggcgctggtgggacctggacagcaccctgccagcgccgcaaccg
ataggcagcagttcctgtgcggcagctgtgagcgttggcagcagagttgagggctcagac
ctgcatgcagaagccagtggcagcagtggcaacgggggcagcgacacacatcacgctggg
cacgcaacggaagatggcgaggcagcagcagcggcggcagcgctgtggcacgcctacctg
tctgagcggctggtggcggtgcgggggctgtcccccgcgcacccggccgtcgagtcgctg
aacaacacctttgagcgggccatggtgtcgatgcacaagatgccccgcatctggctcatg
tacctggacttcatggcggtccaggcctacatcacccgcatgcgccgcctcttcgaccgc
gccctcaccagcctgcccgtcacgcagcacgagcgcgtgtggccgctgtacctgcgcttt
atcggccagccgggcatacccatggagacggcggtgcgggtgtaccggcggtacctcaag
ctggagcccacccacgccgaggagttcatcgcatacctcaagatcaagcagctgtggggg
gaggcggcacgggctgtgcgcacggtggaccccgacaaggctgtgggcaagcctcacacg
ctgtgggtggcctttgccaagctgtacgaacgccactcagacctgcccaacgcgcgcatc
atcttcgaaaaggcggcgcaggcgcggctcaagtacgtggatgacctggcggcggtgtgg
tgcgagtgggcggagatggagctgcgccacaaaaacttccgccgcgcgctggacgtcatg
cggcgcgccacgcagcgccccgcccgcacacgcagccgagaggaggaggctggcctgcct
gtgcaggagcggctgtaccgcagcctcaagctctggtctttctacgtcgacctggaggag
agcctgggcaccctggacagcaccaaggaggtgtacgaggcgatcctggacctgcgcatc
gccaccgcccagattgtgctcaactatgcggcgctcatgctggagcacaagttcttcgag
gaggcgttcagggtgtacgagcgcggcatctctctgttcaagtacccacacgtcaaggac
atctggacagcatacctcacgcaggtgcgcgaggtgtatgagagcgcgatcgaggcgcag
ccgccgtacgcgctgaccgacggcgacacgcgcacgctgtgcctgcgctacgccgcgctg
gagcggcggctgggcgaggtggaccgcgcgcgcgccatctttgtgcacgcagcctcgctg
gcagacccgcgcagcgaccgcgacttctgggccgagtggaacgcgtttgaggtcaagcac
ggcaacgaggacacgttcagggagatgctgcgcatcaagcgctccgtggccgcctccttc
agccagcagcacttcaacaccaccatcatcgacgccgcggcggtggtgggcgaggccggc
gccaagcgcaagcgggagggtggcgacgacatggcggcgctggaggcggcggtggcgggc
gccgccgcggcgcctgcgccggccgcactggagccgggcacgcgcgtgcggggctttgtg
tcggccggcgtcatccagcagggcaaggaggaggaggcggcggctgctggcggcggcgcc
gctgctgcgcccgccaacccggaagagctggagctgggggaggaggaggaggaggcggag
gaggctgccggggagggcgatggcggcgacggcgaggacggcgtgcaggtgcagcagcag
gcggtgccagagggcgtgtttggcagcttgggcgacaagtttgcaaagcggcagaagata
gagggcgcggatggcaccttcaggatcctgcagctggctgacttgcacgtgggcgagggc
cagtccgactccaagacgttggaggtggtgcaaaccgttctcgaggcggagcagccggcg
ctggttgtgatgagcggcgaccaggtgtctggttttgcctaccccgcagccaacctgctg
ggccacctgtcacgcctgctgttctctggcgccagctggtacgagcagcagtggcgccgc
atcgtggcgccgctccacaaggcgggggtccgctatgccgccatcctgggcaaccacgac
ggcgaggcagacctgagccggcgccaggttgtggagttgggtggcgccgctggcggcggc
ctgtcgctgacccagccgggcccctcgcacctcaccggcgcgggcaactactacctggat
gtgtgtgatgcccaggggcagcaggtggcggcccgcatctggatgctggacagcggcaac
cgtggctgcgggcggctggcgtggggctggggctgcgtgggcgccgacacggtggcgtgg
gtgcggcgagaggcggagcagctgccacgcgtgcccagcctggccttcatccacgtcccc
atcccccagatgttccaggcctggaacggcggcagctcggccaacggcaccaagggcgag
ctggtgggatgcccaggcatggactctggctttttcgagctggccagggagatgggcatt
catgccatctactcgggccatgaccacaacaacgactttgcggccagcctggatggcatc
cggctggcttatgggcgcaagaccgggtatgggtcttacggccctacgggcggcctgctg
cacggcgctcgcgtcatcgagctgcggctggggcaggacacagcacacagccccacctgg
attcggcaggaggacgggtcacggcgggagcaggcagacgtgaacgcgccccgccccttc
cgccagcaggtgtgcgccctggatgagagcagctgcgacacgcacctcggccccgagttc
tgccttcggcttcgggaagcccgcagcttcttcgtggtagcaggggtgacgctgacggtg
gcggcggcttgtgttttcaccggcctggcggcgggtgcgcttgcacgacacgcgcggcgt
ggctggcgccagacgcggggctgggagcaggtggctgctgctgacagcagcccacatgac
gtcgacacctccgtatag
DBGET
integrated database retrieval system
