KEGG   Chlorella variabilis: CHLNCDRAFT_134932
Entry
CHLNCDRAFT_134932 CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K14327  regulator of nonsense transcripts 2
Organism
cvr  Chlorella variabilis
Pathway
cvr03013  Nucleocytoplasmic transport
cvr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CHLNCDRAFT_134932
   03015 mRNA surveillance pathway
    CHLNCDRAFT_134932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvr03019]
    CHLNCDRAFT_134932
Messenger RNA biogenesis [BR:cvr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     CHLNCDRAFT_134932
   mRNA cycle factors
    P-body specific factors
     CHLNCDRAFT_134932
SSDB
Motif
Pfam: MIF4G Upf2
Other DBs
NCBI-GeneID: 17354230
NCBI-ProteinID: XP_005846965
JGI: ChlNC64A_1_134932
UniProt: E1ZH54
LinkDB
Position
Unknown
AA seq 918 aa
MGQEGPPPAADGGGGEAASLEALQDATQKINEAAEALERRQQLRALNLNPERPGEDALKR
LDSSMKRNSALIRKLKALSEESRRSVLDDISKTNQSKRGAAALAEVLDRPLPELRQAVTR
IVAAGGEGEAGAAPADLQAQQVFEDEETRAFYESLVDLRAVVPAVLLGDKGKEAAGEQEA
AAGAEQQADGEGGGAAGAAAGAAAGTAAAAGAAAPKGAGVPASASGASLPGGKQEPSYEE
TLEGKGAGEEAREPSQLDLLLGRLPGCVSKELADEAAVAFCYLQNKGARKRLVRALAAEL
PLGALALLPYYARIAATLAQVFPDVAQGVVAHLEAEFGTLQRSKDATARTLEPRVRNMRY
VAELAKFRLFPHGAAFSMLKQLLDDFSGHNIDAACAMVETAGRFFYRLPETSTRMSNFLE
VMMKLRNARNLDARQSGLVDSAYFAVKAADKGARRRQRPPQHEYIRHLVYERLPLGQVTR
VMKKLRRLPWAQYEGYLLKTLLRASHKGRFSQIPHIASLAAGLSRYHPSLGVALVDEVLE
AVEAGLETPDAGFYQRRVAAVRLLGELYNYKLVNSQVIFATLHLILAYGHEQGTPPEVSR
RLDPPSNFFRIRLCCTLLEVCGQYFTRGPSRRKLDRLLPAFQRYLLAKPPLPLDVEFDVQ
DLWDHLRLTPPQYDSYEAACAAVAELEAAEAAAAASGLAPIEEESDGEGPEDGGDAGSDA
GSDAEQDDGDSQAGLDGDEEDVARLESEGEEEGVRMVGPALQPAEVDEDFEREFCQLMLD
HQGRPAAAGGGRQLGPGGAGPAGGPGLPPAAHAHGQGGGEAGEAEAVSFRVMMKRGGRDD
RTRELHIPLTAGMAAHLRQKEEEEAAEKAELKRLVLEANKRDLQEQQDALRAAQQQRRPG
ARGYYGRGGGRGGGGGLF
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgggtcaggagggccctcctcccgcagcagacggcgggggaggggaggccgcctcctta
gaggccctgcaggatgcgacccagaagatcaatgaggcggcagaggcgctggagcggcgg
cagcagctgcgcgccctcaacctcaaccccgagcggccgggcgaggatgccctgaagcgg
ctggactccagcatgaagcgcaactctgcgctcatccgcaagctcaaggcgctgagcgag
gagtcgaggcggtctgtgctggacgacatctccaagaccaaccagagcaagcgcggggcg
gcagcgctggcggaggtgctggaccggccgctgccggagctgcggcaggcggtgacgcgc
atcgtggcggcaggaggggagggggaggccggcgccgcgcccgcagacctgcaggcgcag
caggtgtttgaggatgaggagacgcgagccttctacgagtctctggtggacctgcgggcc
gtagtgcctgcggtactgctcggggacaagggcaaggaggcggcaggggagcaggaggcg
gcggccggcgccgagcagcaggcagatggggagggcggcggtgcggcgggggcggccgcg
ggggcggccgcaggcacggcggcggcggcgggggcggcggcgcccaaaggggcgggcgtg
ccggcgtctgccagtggcgcctcgctgcccggcggcaagcaggagccgagctatgaggag
actttagagggcaagggggcgggggaggaggcgcgggagcccagccagctggacctgctg
ctggggcgcctgcccggctgcgtgagcaaggagctggctgacgaggcggcggtggccttc
tgctacctgcagaacaagggcgcccgcaagcgcctggtgcgcgcgctggcggcggagctg
cccctgggcgcgctggcgctgctgccatactacgcccgcatcgccgccacgctggcgcag
gtcttcccggacgtggcgcagggcgtggtggcgcacctggaggccgagtttggcaccctg
cagcgcagcaaggacgccaccgcgcgcacgctggagccgcgcgtgcgcaacatgcggtac
gtggccgagctggccaagttccgcctgttcccgcacggcgccgccttctccatgctcaag
cagctgctggacgacttctcggggcacaacatcgacgccgcctgcgcgatggtggagaca
gcggggcgctttttctaccggctgcccgagacctccacccgcatgtccaactttttggaa
gtcatgatgaagctgcgcaacgcccgcaacctggacgcccgccagagcggcctcgtcgac
tccgcctactttgcggtcaaggcggcggacaagggggcgcgtcgcaggcagcgcccgccg
cagcacgagtacatccgccacctggtgtacgagcggctgccgctggggcaggtcacgcgg
gtgatgaagaagctgcggcggctgccctgggcgcagtacgaagggtacctcctcaaaacc
ctgctgcgcgcctcccacaagggccgcttctcccagatcccgcacatcgccagcctggcg
gcgggactgtcgcggtaccaccccagcctgggcgtggcgctggtggatgaggtgctggag
gcggtggaggcggggctggagacgccagacgcgggcttctaccagcgccgcgtggcagcg
gtacgcctgctgggcgagctgtacaactacaagctggtcaactcccaggtcatctttgcc
accctgcacctcatcctggcctacggacacgagcagggcacgccgcccgaagtcagcagg
cgcctggaccccccctccaacttcttccgcatccgcctctgctgcaccctgctggaggta
tgcgggcagtacttcacgcgcggcccgtcccgccgcaagctggaccgcctcctccccgcc
ttccagcgctacctgctggccaagccgccgctgccgctggatgtggagtttgatgtgcag
gacctgtgggaccacctgaggctgacccctccgcagtacgacagctacgaggccgcctgc
gccgcggtggcggagctggaggcggccgaggcggcggccgcggccagcgggctggcgccg
atcgaggaggagagcgacggcgaggggccggaggacggcggcgatgccggctctgatgcg
ggcagcgacgcggagcaggacgatggcgacagccaggcggggctggacggtgatgaggaa
gatgtggcgcggctggagagcgagggggaggaggagggcgtgcgcatggtgggccccgcc
ttgcagccggccgaggtggacgaagactttgagcgcgagttctgccagctcatgctggac
caccagggccgccccgcagcagccggcggcggccgccagctgggccccggcggcgcgggg
ccggcgggggggcccgggctgccacccgcggcccacgcccatggtcagggcggcggcgag
gcgggggaggcggaggcggtgtcgttccgggtgatgatgaagcggggggggcgggacgac
cgcacccgggagctgcacatcccgctgacggccggcatggcggcgcacctgcggcagaag
gaggaggaggaggcggcggagaaggcggagctcaagcggctggtgctggaagcaaacaag
cgcgacttgcaggaacagcaggacgcactgcgagcagcgcagcagcagcggcggcctggc
gcgcgcggctattacggccgtggcggcggaaggggaggagggggagggctgttttga

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