Chlorella variabilis: CHLNCDRAFT_134959
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Entry
CHLNCDRAFT_134959 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
cvr
Chlorella variabilis
Pathway
cvr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CHLNCDRAFT_134959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvr04121
]
CHLNCDRAFT_134959
Enzymes [BR:
cvr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
CHLNCDRAFT_134959
Ubiquitin system [BR:
cvr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
CHLNCDRAFT_134959
Multi subunit type E3
ERAD complex
CHLNCDRAFT_134959
LMBR1L-GP78-UBAC2 complex
CHLNCDRAFT_134959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
RING_XB3-XBAT31
zf-RING_16
zf-C3HC4_4
zf-C3HC4_3
ASTER
Motif
Other DBs
NCBI-GeneID:
17354470
NCBI-ProteinID:
XP_005847177
JGI:
ChlNC64A_1_134959
UniProt:
E1ZH79
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MPPVVRQSPLLSEPCLMLAVYTLVSGAGVYSQLTASKEGQEAAGEAAKMLHLATSGYDVD
TASAKRLAFATLEMVLQTQLGVFFAANLAAGVYAGFTLVTKTLFLGQLTASETSQLAEAR
GRGWERFLKFAMLKVAFLAVVRSPGYGGVMQASWLAWCAVICWFSMFTKLASLRGDALLS
SPSATLAQHLRILLLLGGILAQDLSWVAGFLRTARGMQGGSLSHALLWLFDATFVAVDAA
YALLKYAVQAWDHCKVMRAEVRGEEREPWEGRTELVYWLNLAADLTLLGLSLFHYLHLWW
LHGLQLQLIDGVLFLDVRLLVGVIRCRVRRHLSYRRLQHQLRHSFADATVLQLAEHRCCI
CLDSMKAGKLLPCGHVMHVSCLCAWLQQNATGSIDGLLD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggttgtgcgccagagcccccttctgtccgagccctgcctgatgctggcagtc
tacacgctggtcagcggggccggcgtgtactcgcagctgaccgccagcaaggagggccag
gaggcggcgggagaggcagccaagatgctgcacctggcgacgagcggctatgatgtagac
acagcgtcagccaagcggctggcctttgcgacgctggagatggtgctgcagacgcagctg
ggcgtcttctttgcggcaaacctggcggcgggagtctacgccggcttcaccctggtcacc
aagaccctgtttctgggacagctgaccgcgtccgagacctcgcagctggccgaggcacgc
ggcagggggtgggagaggttcctcaagtttgccatgctcaaggtggcgttcctggcggtg
gtgcgcagccctgggtatgggggcgtgatgcaggcaagttggctggcctggtgcgccgtc
atctgctggttctcaatgttcaccaagctggccagcctgcgcggtgacgccctcctgtcc
tcgccgtccgccaccctggcgcagcaccttcgcatcctgttgctgctgggcggcatcctg
gcgcaagacctcagctgggtggctggcttcctgcgcaccgcacgaggcatgcaggggggc
tcgctaagccatgcgctgctgtggctgtttgatgccacgtttgtggcggtggatgcggca
tatgctctgctgaagtatgcggtgcaagcctgggaccactgcaaggtgatgcgggcggag
gtgcgcggcgaggagcgggagccgtgggagggccgcaccgagctggtgtactggctgaac
cttgcggccgacctcacgctgctcgggctgagcctcttccactacctgcacctctggtgg
ctgcacggtttgcagctgcagctgatagacggggtgctgttcctggatgtgaggctgctg
gtgggcgtcattcggtgccgcgtgcgccgccacctgagctaccgccgcctgcagcaccag
ctgcggcacagctttgcggatgccacggtactgcagctggcagagcaccgctgctgcatc
tgtttggactcaatgaaggcgggcaagctgctgccatgcggccacgtcatgcacgtgtcc
tgcctgtgcgcctggctccagcagaatgccaccggctcgattgacggcttgctggattga
DBGET
integrated database retrieval system
